Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 325 4e-84 >seq10 Length=365393 Score = 325 bits (360), Expect = 4e-84 Identities = 604/874 (69%), Gaps = 17/874 (2%) Strand=Plus/Plus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| ||||| |||||||| |||||||| | || || || || |||||||| |||||| Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537 Query 13444 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501 |||||||| | | || || |||| |||||||||| | | | | || |||||| |||| Sbjct 99538 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 99595 Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561 |||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 99596 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 99655 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 | ||| || || ||||| ||| || || ||| | || || | | ||| | Sbjct 99656 CGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 99715 Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 99716 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 99775 Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 99776 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 99835 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 99836 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 99895 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | | | | ||| ||||| |||| | ||| | || ||||||||| ||||||||| | Sbjct 99896 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGG 99955 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC-CTTCTCTTTA 13920 |||| || ||| | |||||||| |||||||||||||| ||| ||| |||| Sbjct 99956 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 100015 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 | ||| ||||| |||||||| | ||| ||| |||| || || |||||||| || Sbjct 100016 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 100074 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCT 14039 || || || ||||| |||||| |||| |||| ||| || || | | |||| | Sbjct 100075 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 100133 Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14099 || | || |||||||| || ||||||||| ||| ||||| || || | | || Sbjct 100134 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 100193 Query 14100 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14153 ||| ||| || || |||||| ||| | | || |||||||| ||||| || || Sbjct 100194 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 100250 Query 14154 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 ||||| | ||| || | ||||| ||| || | || || || |||||| ||| || Sbjct 100251 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 100310 Query 14214 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14247 ||| | ||| || ||||| | ||||| ||| Sbjct 100311 TTCGTGATACTTGATTGGAAAGAGAACAAACCTT 100344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587244586400