Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq24 421 9e-113 seq10 280 2e-70 >seq24 Length=140564 Score = 421 bits (466), Expect = 9e-113 Identities = 1359/2098 (65%), Gaps = 43/2098 (2%) Strand=Plus/Minus Query 70837 AGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGT 70896 || || ||||| ||||| || || || |||| || || |||||||| ||||| | Sbjct 88796 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 88737 Query 70897 TTGGA-ATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGC 70955 || || | | |||| | || || ||||| || || ||||| | | | || Sbjct 88736 TTACCCATTGTT-GGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 88678 Query 70956 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015 || || || |||||||| | || || |||||||| | || ||||| | ||| ||||| Sbjct 88677 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 88618 Query 71016 -AACTCGCTTAATATCTTCTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAA 71071 || || ||| || |||| |||| || | || |||||||| || ||| ||||| | Sbjct 88617 TAAGTC-CTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGA 88559 Query 71072 TAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGAT 71131 | || ||||| || |||||||| | | | || ||| |||| | | || Sbjct 88558 TGATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATAT 88499 Query 71132 GAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTAT 71191 ||| || || | || ||||| || | || ||||| | || ||||||||| || | Sbjct 88498 AAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGT 88439 Query 71192 ACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTG 71251 | ||||| | | || || | || | |||||||| ||||| ||||||||||| |||| Sbjct 88438 AAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTG 88379 Query 71252 CCAC---CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCC 71308 | || |||| || |||||| | ||||| | |||||| || |||| || |||| Sbjct 88378 CAACAAGCAAT-GA--ATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 88322 Query 71309 AATTCCAAAGATCCGATGG--TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT 71366 | | | | | | ||| | || | || | Sbjct 88321 AGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGA--CCTTGGGA 88264 Query 71367 AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGC 71426 || |||||| || | || || |||||||| || | || || |||| ||| || Sbjct 88263 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTCATGGATAATTCAACACTTGC 88204 Query 71427 CTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGG 71486 ||| || || ||| |||||||||||| ||||| | |||| || || | |||||| || Sbjct 88203 CTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGG 88144 Query 71487 GCTATCAAATGGATAATTT-AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATAC 71545 ||||||||| |||| | || | || || || ||||| || ||||| || |||| | Sbjct 88143 CGAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAG 88085 Query 71546 CGATAGGTCTGTGTCTCTTATTAGAAATTT---CAGCTTCTGGAATAGGATAATAATTAA 71602 | || ||||||| |||| |||| || || ||| ||| || |||||| || || Sbjct 88084 CAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTC 88028 Query 71603 TATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 71662 |||| || |||||||| | ||| | | || || | || | || || || Sbjct 88027 TATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAA 87968 Query 71663 AATCAAATCTCC---------CATCTATT---ACAAACACGTTCAAGGCAACAGATGCCA 71710 | | | | | | |||| || ||||| | ||| |||||| || | Sbjct 87967 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 87908 Query 71711 GATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTAC 71770 ||||||||| ||| || | || | ||||| | ||||||| ||| | ||| Sbjct 87907 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 87848 Query 71771 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 71830 | | ||||| || ||||||||||||||| || |||||||| ||||||||||| | Sbjct 87847 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 87788 Query 71831 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 71890 || || || |||||||||||| | |||| ||||| |||| | ||| | | | | Sbjct 87787 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTG 87728 Query 71891 CCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACT 71950 | || ||| | || || ||| ||||||||| |||| ||||||||| || ||| | Sbjct 87727 CTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATT 87668 Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010 | || || | ||| || ||||| |||| | || | | || | ||| ||| Sbjct 87667 CATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTT 87608 Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070 ||| | | |||| || |||||| | |||||||||||| | ||| |||| ||||| Sbjct 87607 CATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTC 87548 Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 72130 | | |||| || || || || || || | | ||| | || | | |||||| | Sbjct 87547 TTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTG 87488 Query 72131 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTA 72190 ||||||| || || | |||| || | | || || | ||| || || || || || | Sbjct 87487 AATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAA 87428 Query 72191 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 72250 || || || ||||||||| | || || | |||||||||||| |||||||||| ||||| Sbjct 87427 CATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCAT 87368 Query 72251 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCC 72310 | || |||| ||||| ||| | | | |||||| || || || || || | Sbjct 87367 TAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCAC 87308 Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370 | || |||| || || || || ||| ||| || ||||||||||| || || || || Sbjct 87307 CAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAAT 87248 Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430 | ||| |||| || || ||||| ||||||||| | | ||| |||| ||| | Sbjct 87247 CGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGA 87188 Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490 | | || |||||||| || || || | | | |||| | ||| || || |||||| Sbjct 87187 AAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAA 87128 Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550 | || || ||||| ||| || || || || || | ||||| | ||| || || | Sbjct 87127 CAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCC 87068 Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 72610 ||||| | ||||| ||||||| | || | || |||| || ||||| ||||||| Sbjct 87067 TTTCAGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAA 87008 Query 72611 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATT 72670 ||||||| || ||||||| || ||| ||| | || | | ||| | || || Sbjct 87007 AATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTT 86948 Query 72671 TGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 72730 | | || || ||| || ||||||| || |||| | |||| ||||||||||||| Sbjct 86947 TTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGAT 86888 Query 72731 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 72790 || ||| | ||| | | | |||||| ||| || |||||| ||| |||| Sbjct 86887 CAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTA 86828 Query 72791 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG--TTG-TGTAGTAC 72847 ||||| | || | ||| || || | | |||||||||||||| | | ||| || Sbjct 86827 AGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATAT 86768 Query 72848 AAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || || |||| || || | | | || ||||| || ||||| || |||| ||| Sbjct 86767 AA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 86713 >seq10 Length=365393 Score = 280 bits (310), Expect = 2e-70 Identities = 596/884 (67%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||||||||| || || || || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||||||||| | || || | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 || || || || || |||| ||| | |||| ||||||| || || || || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 42072 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 42073 ATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 42132 |||| || | ||| |||||||||| ||| | |||||||| ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 42133 TAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTC 42192 | || | |||||| | ||| || || || |||||||| ||||| ||||| || ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 42193 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTT 42249 || || ||||| || | | |||||| || | ||| | || | ||||| || Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 99941 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 | |||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 99942 TAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 100001 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||| | || ||||| ||||| | | ||| |||| ||||| Sbjct 100002 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 100061 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT- 42428 ||||||||| || || || || || ||||||||| | ||||| | || || || | Sbjct 100062 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 100121 Query 42429 -CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | ||| || ||| |||||||||| || ||||| || ||| || ||||| ||| Sbjct 100122 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 100179 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCCAATCATTG 42544 || | || | || || || |||| | | ||| || |||||||||| Sbjct 100180 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 100239 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 | |||||| || | ||| | ||| || | ||||| || |||||||||||||| || ||| Sbjct 100240 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 100299 Query 42605 ATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || | ||| || || ||||| | ||||| || | |||||| || Sbjct 100300 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137018797600