Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 311 7e-80
>seq10
Length=365393
Score = 311 bits (344), Expect = 7e-80
Identities = 602/877 (69%), Gaps = 21/877 (2%)
Strand=Plus/Plus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| ||||| |||||||||||||| || | | ||||| || |||||||| |||||
Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537
Query 12935 GGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCA 12991
|||||| | ||| | |||| |||| ||| |||||| | | | | ||| || |||
Sbjct 99538 GGATTTGT--AACG-TCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCA 99594
Query 12992 ACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATA 13051
|||||||| | ||||| ||| ||||| ||||| || | || || ||||| |
Sbjct 99595 ACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGG 99654
Query 13052 GCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACG 13111
|| || || || | | ||||| |||||||| |||||| ||| || | ||| | |
Sbjct 99655 GCGTCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATT 99714
Query 13112 TTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAAATCACAGTGCAAT 13171
|| || ||| | || | ||| ||| | || ||| |||||||| || ||
Sbjct 99715 TTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAA 99774
Query 13172 CCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTT 13231
||||||||||||| || |||||||| || || || | ||| ||||| | |||| |||
Sbjct 99775 CCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTT 99834
Query 13232 TTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAAC 13291
|| | ||| || || | ||||| ||||| || || || || |||||||| || |||||
Sbjct 99835 TTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAAT 99894
Query 13292 GCTATCAACCTTTCACCATACGTACTATTTTTACTCT-CTATCCACTTTCTGGCCCAGTT 13350
|| | |||||| || || || || |||| ||| | ||||| ||| ||||| |
Sbjct 99895 GCCACCAACCTCTCTGCAAACAATGCATCTTTA-TCTGCAATCCATTTTAAAGCCCATTC 99953
Query 13351 TGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTT 13410
|| |||| || | || || |||| ||||| || ||||| | | |||||||
Sbjct 99954 GGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTT 100013
Query 13411 ACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCAT 13470
||| || |||||||| |||||||| ||| |||| |||||||| ||||||||
Sbjct 100014 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 100073
Query 13471 CGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC---GGAGTAAAA 13527
| |||||||| ||||| |||||| ||||||||| | ||||| || ||| |||
Sbjct 100074 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAA 100131
Query 13528 TCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTG 13587
| | || |||| ||||| || ||||| || ||| ||||||||| || || || |
Sbjct 100132 T-TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAA--CT 100188
Query 13588 CTT--AATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATCTGGAAAATCTTTT 13642
||| ||| || | |||| ||||| ||| || |||||| | ||||||||
Sbjct 100189 CTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 100248
Query 13643 GATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCAT 13702
|| | ||| | ||||| | ||||| ||||| || | |||||||| ||||| |||
Sbjct 100249 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 100308
Query 13703 ATATCCTTATAAACAATGGGAAACACAACGTATCTTC 13739
|| || | ||| || ||||| | ||| | ||||
Sbjct 100309 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTTC 100345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430981034324520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |