Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq10 221 3e-52
seq115 140 7e-28
seq11 140 7e-28
seq1 134 3e-26
seq4 109 1e-18
>seq10
Length=365393
Score = 221 bits (244), Expect = 3e-52
Identities = 432/626 (69%), Gaps = 18/626 (3%)
Strand=Plus/Minus
Query 268673 GAACCGCTTTTA---GTAAATAACCCAGATAGATTTGTGATATTTCCAATACAGCATGGT 268729
||||| |||||| | ||| || ||| || ||||| | |||||||| || ||
Sbjct 100370 GAACCACTTTTAAAGGAAAACAAG--AGA-AGGTTTGTTCTCTTTCCAATCAAGTATCAC 100314
Query 268730 GATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGAT 268789
|| || ||| |||||||| |||| | || ||||| ||||||| || ||| | |||
Sbjct 100313 GAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTCTGGACTGCGGAGGAAATTGAT 100254
Query 268790 CTGTCTTATGACTTAATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATA 268846
|| || | || || |||||||| ||| | ||| | || |||||| || ||
Sbjct 100253 CTCTCCAAAGATTTGCATGATTGGAACAATAGATTGAACGAAAATGAAAGATTCTTCATT 100194
Query 268847 TCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAG 268906
|| |||| ||||| ||||| | | ||||||||| || || |||||| |||| |||
Sbjct 100193 TCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAG 100134
Query 268907 AAGTTCTGTCAAGAG--GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAG 268964
|| |||| |||| | || || ||||| || || | |||||| || || ||||| ||
Sbjct 100133 AATTTCT--CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTA 100076
Query 268965 CTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATA 269024
|| ||||| |||||||| || | || | |||| || |||||||| || | |||
Sbjct 100075 TGATGGAAAACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATC 100016
Query 269025 ACAACGAAAAGAAAAGACT-ATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaa 269083
||| | |||| || || ||| | | || ||| || ||| | | ||||
Sbjct 100015 -CAAAGGAAAGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAG 99957
Query 269084 TCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGTT 269140
| ||||||||| | |||||||| |||| | || || | ||| ||||| ||
Sbjct 99956 GCCGAATGGGCTTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTG 99897
Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200
|| ||||| ||||| |||||||| ||||| || || || ||||| | ||||| ||||||
Sbjct 99896 GCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTG 99837
Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260
|| || ||||| | |||||||| || || ||||| ||||| |||| | || || |||
Sbjct 99836 AAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAA 99777
Query 269261 GGTTTACACTGCGACTTCGCTTGTTT 269286
|||||||| ||| || ||||||||
Sbjct 99776 GGTTTACATACCGATTTTGCTTGTTT 99751
>seq115
Length=8510
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| || | |||||||| || ||||| || ||||||||
Sbjct 1937 CCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 1878
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||| ||||||| ||| || || ||||| || || || ||||| ||||| ||
Sbjct 1877 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 1818
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || || || | || ||||| || | || || | || ||
Sbjct 1817 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACT 1758
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|||| ||||||||||||||||| | ||||| ||||| || ||||| ||
Sbjct 1757 TCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTT 1708
>seq11
Length=336598
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| || | |||||||| || ||||| || ||||||||
Sbjct 4921 CCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 4980
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||| ||||||| ||| || || ||||| || || || ||||| ||||| ||
Sbjct 4981 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 5040
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || || || | || ||||| || | || || | || ||
Sbjct 5041 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACT 5100
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|||| ||||||||||||||||| | ||||| ||||| || ||||| ||
Sbjct 5101 TCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTT 5150
>seq1
Length=782669
Score = 134 bits (148), Expect = 3e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || |||||||| ||||||||||| |||
Sbjct 231627 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231686
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || ||||| || || || || || || || || ||||| ||||| | ||
Sbjct 231687 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231746
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | ||| || || || || || |||||
Sbjct 231747 ACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231806
Query 104543 TTTACAAATATCTGCATTT 104561
|| ||||| ||||||||||
Sbjct 231807 TTGACAAAGATCTGCATTT 231825
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || |||||||| ||||||||||| |||
Sbjct 230943 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231002
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || ||||| || || || || || || || || ||||| ||||| | ||
Sbjct 231003 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231062
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | ||| || || || || || |||||
Sbjct 231063 ACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231122
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 231123 TTGACAAAGATCTGCAT 231139
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || |||||||| ||||||||||| |||
Sbjct 231171 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231230
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || ||||| || || || || || || || || ||||| ||||| | ||
Sbjct 231231 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231290
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | ||| || || || || || |||||
Sbjct 231291 ACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231350
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 231351 TTGACAAAGATCTGCAT 231367
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || |||||||| ||||||||||| |||
Sbjct 231399 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 231458
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || ||||| || || || || || || || || ||||| ||||| | ||
Sbjct 231459 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 231518
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | ||| || || || || || |||||
Sbjct 231519 ACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 231578
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 231579 TTGACAAAGATCTGCAT 231595
>seq4
Length=639611
Score = 109 bits (120), Expect = 1e-18
Identities = 128/168 (76%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 165104 GATGAATGGAATACTTGGAATAAAAT-ACACGATCCTGTTTTACATATAGAGCTAAGAAG 165162
|||||||||| | ||||||||| | ||| |||||||| || ||||||||||||||||
Sbjct 321807 GATGAATGGAGTTCTTGGAATATCAGGACA-GATCCTGTGTTGCATATAGAGCTAAGAAA 321865
Query 165163 ATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGATAGC-TA 165221
|||||||||||| | | || || || |||| ||||| | ||| || || || |
Sbjct 321866 ATGGGCAGATATTTTAATTATTGCCCCTCTAACGGCAAATACTTTGAGTAAAATTGCATT 321925
Query 165222 ACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATA 165269
| ||| | ||| |||| |||||||| | | ||||||||||||||||
Sbjct 321926 AGGGT-TGTGTGATAATTTGTTAACTAATGTTGTTAGAGCGTGGAATA 321972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151394564404080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |