Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq165 120 5e-23
seq42 120 5e-23
seq6 107 3e-19
>seq165
Length=4219
Score = 120 bits (132), Expect = 5e-23
Identities = 179/253 (71%), Gaps = 1/253 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| || |||||||||||||||| || ||||||||||| || | | | ||| |
Sbjct 659 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 717
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | || ||||| || | | ||| | |||
Sbjct 718 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 777
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| || ||||| || ||||| || ||||| || | |||
Sbjct 778 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 837
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| ||||||||| | ||| |||||||||| ||||| | ||||| | | ||||||||
Sbjct 838 ACCGTCACCTCCTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 897
Query 16688 TTTGGAAGTTAAT 16700
||||| ||| ||
Sbjct 898 TTTGGTGGTTGAT 910
>seq42
Length=53431
Score = 120 bits (132), Expect = 5e-23
Identities = 179/253 (71%), Gaps = 1/253 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| || |||||||||||||||| || ||||||||||| || | | | ||| |
Sbjct 3332 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 3274
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | || ||||| || | | ||| | |||
Sbjct 3273 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 3214
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| || ||||| || ||||| || ||||| || | |||
Sbjct 3213 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 3154
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| ||||||||| | ||| |||||||||| ||||| | ||||| | | ||||||||
Sbjct 3153 ACCGTCACCTCCTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 3094
Query 16688 TTTGGAAGTTAAT 16700
||||| ||| ||
Sbjct 3093 TTTGGTGGTTGAT 3081
>seq6
Length=560432
Score = 107 bits (118), Expect = 3e-19
Identities = 175/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| |
Sbjct 63486 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 63544
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| | | | ||| | |||
Sbjct 63545 AGAGGTGGTGTTAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 63604
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | |||||| || || || |||||||| ||||| || | |||
Sbjct 63605 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 63664
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || || | ||| | |||||||||||||| | ||||| | | |||| |||
Sbjct 63665 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 63724
Query 16688 TTTGGAAGTTA 16698
||||| ||||
Sbjct 63725 TTTGGTGGTTA 63735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074962280180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |