Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq10 257 2e-63 >seq10 Length=365393 Score = 257 bits (284), Expect = 2e-63 Identities = 601/900 (67%), Gaps = 17/900 (2%) Strand=Plus/Plus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| ||||||||||| ||||| || || | | || || |||||||| || ||| Sbjct 99478 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 99537 Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319 |||||| | | ||| || | |||||| | | | | || ||||||||| ||| Sbjct 99538 GGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCAACA 99597 Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCT 21379 || || | ||| |||||||| || || ||||||||||| ||| || ||||| || || Sbjct 99598 AACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCG 99657 Query 21380 TTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGAT 21439 | || || | ||||| ||| |||||||| ||| || | | | | | | Sbjct 99658 TCAGTGAAGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTT 99717 Query 21440 --GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAAC 21497 || || |||| || || ||| ||| | |||||| |||||||| ||| |||| Sbjct 99718 TCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 99775 Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| |||| || | || || || || || ||||| ||||| || |||||||||| Sbjct 99776 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 99835 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | ||||| || || || ||||||| || || |||||||| || ||||| |||||||||| Sbjct 99836 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 99895 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 | || || | || | | | |||||||| ||||||||| ||||||| | Sbjct 99896 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGG 99955 Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATC 21735 ||||||| || ||||| ||||| ||||| || || || |||| ||| |||| | Sbjct 99956 CCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA--ATTCACTTTCCTT 100013 Query 21736 TACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTAT 21795 | ||| | ||| | ||| |||| ||||| || ||||| || Sbjct 100014 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 100073 Query 21796 CGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC--CTCGGAATAAAAT 21853 | || || || || || |||||| | ||||||| | |||||| | | | ||| | Sbjct 100074 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATT 100133 Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913 | | | | || |||||||| ||||| |||||| || ||||| || || | | || Sbjct 100134 C--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 100191 Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGAT 21970 || || ||| ||| || || | ||| || |||||||| |||||||| || Sbjct 100192 GAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAG 100251 Query 21971 AAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTTATACATAATCCAGAT 22029 | ||| | ||| || | ||||| |||| | || ||||| || ||||| ||| || Sbjct 100252 AGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAAT 100310 Query 22030 ATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 || | ||| | |||||||| | |||||||| | || ||| |||||||||||| Sbjct 100311 TTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTCCTTTAAAAGTGGTTC 100370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899071322400