Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq24 428 6e-115 seq10 298 7e-76 >seq24 Length=140564 Score = 428 bits (474), Expect = 6e-115 Identities = 1400/2158 (65%), Gaps = 39/2158 (2%) Strand=Plus/Minus Query 61988 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62047 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 88839 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 88780 Query 62048 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62107 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 88779 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 88720 Query 62108 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62167 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 88719 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 88660 Query 62168 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62226 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 88659 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 88601 Query 62227 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62283 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 88600 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 88541 Query 62284 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62343 ||||||||| | | | || ||| |||| | | || || || || | || | Sbjct 88540 AATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAAGGGTTGACAATCTGGA 88481 Query 62344 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62403 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 88480 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 88421 Query 62404 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62463 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 88420 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 88361 Query 62464 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62521 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 88360 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 88301 Query 62522 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62581 | || ||||| | ||| | || |||||| || | || Sbjct 88300 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 88243 Query 62582 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62641 || |||||||| ||| || | || |||| ||| ||||| || ||| | | |||||| Sbjct 88242 CTCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 88183 Query 62642 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 62700 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 88182 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 88124 Query 62701 AGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62760 | | || || || || || || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 88123 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 88064 Query 62761 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62817 | || || ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 88063 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 88007 Query 62818 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62867 || | | || ||||| | ||| |||| |||| | || || || Sbjct 88006 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 87949 Query 62868 C-CATCTATTACAA-ACATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 |||| || ||| | ||| ||| |||||| || | ||||||||| ||| || Sbjct 87948 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 87889 Query 62924 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 62983 | || | ||||| | || ||| ||| | ||| | | |||||| || || Sbjct 87888 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 87829 Query 62984 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63043 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 87828 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 87769 Query 63044 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63103 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 87768 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 87709 Query 63104 TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63163 ||| | ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 87708 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 87649 Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223 ||| ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 87648 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 87589 Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 87588 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 87529 Query 63284 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 87528 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 87469 Query 63344 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63403 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 87468 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 87409 Query 63404 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCT 63463 | | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 87408 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 87349 Query 63464 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63523 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 87348 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 87289 Query 63524 TGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAG 63583 || ||| ||| || || ||||||||||| || ||| ||| || |||| || || Sbjct 87288 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 87229 Query 63584 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63643 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 87228 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 87169 Query 63644 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63703 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 87168 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 87109 Query 63704 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63763 |||||| || || || || | ||||| | || || || |||||| | ||||| || Sbjct 87108 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCAGCAATCTTACCATT 87049 Query 63764 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63823 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 87048 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 86989 Query 63824 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 63883 || || ||| ||| | | | | ||| | || ||| | || || ||| || Sbjct 86988 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 86929 Query 63884 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 86928 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 86869 Query 63944 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 64003 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 86868 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 86809 Query 64004 GGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 64060 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 86808 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 86752 Query 64061 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTC 64118 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| Sbjct 86751 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTC 86694 >seq10 Length=365393 Score = 298 bits (330), Expect = 7e-76 Identities = 600/884 (68%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | |||||| || || || || | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 || || || || || |||| ||| | |||| |||||| || || || || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 | || | |||||| | ||| || ||||| || ||||| ||||| ||||| || ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 33488 || |||||||| || | | |||||| || | || | || | ||||| || Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 99941 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 | |||||| |||||||| | || | ||| || || ||||| || ||||| || | | Sbjct 99942 TAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 100001 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | |||| || |||||| | |||||||| ||||| | | ||| |||||||||| Sbjct 100002 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 100061 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT- 33667 ||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 100062 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 100121 Query 33668 -CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | ||| || || | ||||||||||| ||||| || ||| || ||||| ||| Sbjct 100122 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 100179 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 33783 || | || | || || || |||| | | | | | || |||||||||| Sbjct 100180 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 100239 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 100240 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 100299 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 || | ||| || || | ||| | |||||| || | |||||| || Sbjct 100300 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945175421600