Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 6e-25
seq115 118 1e-21
seq11 118 1e-21
>seq2
Length=717657
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| |||||| | ||||| || || ||||| || || | || ||| | ||| | |||||
Sbjct 277583 CAAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATC 277524
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | ||||| |||||||| || || ||||| || || || ||
Sbjct 277523 TTCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGA 277464
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||||||||| || | | || || ||| | ||||||| ||||| | ||||||
Sbjct 277463 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTA 277404
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| |||||||| | || ||||| ||||| | ||||| ||
Sbjct 277403 CAACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 277353
>seq115
Length=8510
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| |||||| | ||||| ||||| |||||||| || | || ||| | ||| | || |||
Sbjct 1708 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 1767
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||||| ||||| | ||||| || || ||||| ||||| || || || ||
Sbjct 1768 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 1827
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
||||||||||| || | | || || ||| | ||||||| ||||| | |||||
Sbjct 1828 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 1887
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| ||||||||| | || | ||| ||||| | ||||| ||
Sbjct 1888 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 1937
>seq11
Length=336598
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| |||||| | ||||| ||||| |||||||| || | || ||| | ||| | || |||
Sbjct 5150 AAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCA 5091
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||||| ||||| | ||||| || || ||||| ||||| || || || ||
Sbjct 5090 TCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5031
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
||||||||||| || | | || || ||| | ||||||| ||||| | |||||
Sbjct 5030 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTAC 4971
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| ||||||||| | || | ||| ||||| | ||||| ||
Sbjct 4970 AACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 4921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660844347200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |