Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq10 190 5e-43
seq24 179 1e-39
>seq10
Length=365393
Score = 190 bits (210), Expect = 5e-43
Identities = 496/748 (66%), Gaps = 20/748 (3%)
Strand=Plus/Minus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
||||||| ||||||||| | | || |||||||| ||| ||| |||| |||||
Sbjct 100186 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 100127
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
|| ||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||
Sbjct 100126 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 100067
Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393
| |||| ||||||| |||||| | || | | | | | ||||| | | |||
Sbjct 100066 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 100008
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452
| ||| ||||||| || ||| || || | || || ||| | ||||| || |||
Sbjct 100007 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGG 99948
Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCT 22509
|| | |||||||| || || | |||| || || | | | |||||||||
Sbjct 99947 GCTTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCT 99888
Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569
| |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| |
Sbjct 99887 GCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGA 99828
Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629
| | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | |||
Sbjct 99827 GGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACAT 99768
Query 22630 ACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---AA 22686
||||||||||| ||| |||| | | ||| | | |||| ||| | | ||
Sbjct 99767 ACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAAA 99714
Query 22687 ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCG 22746
| ||| | || ||||| | || ||||| ||||| || | || ||
Sbjct 99713 ATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAGATACTTCACTGACGCC 99654
Query 22747 TTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTT 22806
|||| || | | | ||||| ||| || | ||| || ||| | | ||||||
Sbjct 99653 CTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTT 99594
Query 22807 GCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCCA 22863
|||||| | ||| | ||| || | |||| || |||| ||| ||| |||| ||||||
Sbjct 99593 GCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG--GTAT-ACGACGTTACAAATCCA 99537
Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923
|| || | ||||| ||||| |||| || || || || || |||||||| |||||
Sbjct 99536 TTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGTC 99477
Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951
|| |||||||| |||||||| ||||
Sbjct 99476 TCAGACTACCAAAAGGCAGGTGTCATGG 99449
>seq24
Length=140564
Score = 179 bits (198), Expect = 1e-39
Identities = 723/1120 (65%), Gaps = 38/1120 (3%)
Strand=Plus/Plus
Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150
||| | |||||||||||||||||||| | |||| ||| | || | |||||||| ||
Sbjct 86707 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 86766
Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210
||| |||| | | ||||| ||||| | | |||||||| | ||||| ||||
Sbjct 86767 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 86826
Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270
| || || ||| | || || || || || | || || |||| ||| |
Sbjct 86827 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 86886
Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330
|| | || | ||||| | ||| | ||| | | || | | ||| | |||
Sbjct 86887 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 86946
Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389
|||||| | | || ||||| | || ||||||| | || || | ||| | |||
Sbjct 86947 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 87006
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
||| || | || || | || | || || | | || |||||| | |||| |||
Sbjct 87007 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCTGA 87065
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| |
Sbjct 87066 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 87125
Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565
| |||||||| ||||| | || ||| | || | ||||| || || | ||||
Sbjct 87126 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 87181
Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621
| | | |||| | || |||| | |||| | |||||||| || |||||| | |
Sbjct 87182 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 87237
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||||||||||||||| || ||||||| ||| || | || | |||||| | ||||||
Sbjct 87238 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 87297
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737
|| | ||| || || ||||| || || || ||| || | | ||| | |||
Sbjct 87298 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 87353
Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || | || | | || |||||| | |||| ||| || | || ||| | |
Sbjct 87354 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 87412
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854
| ||||| ||||| || ||||| ||||| | |||| | || |||||||| | ||
Sbjct 87413 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 87470
Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914
| | |||||| ||| | |||||| |||| ||| |||| || |||||||| || ||
Sbjct 87471 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 87530
Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974
||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| |
Sbjct 87531 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 87590
Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
| || ||| | | | ||||| | |||| | ||| ||| || ||| |
Sbjct 87591 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 87650
Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091
||||||| ||||| || | | | ||||| ||| |||| || | ||| | |
Sbjct 87651 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 87708
Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151
||| | | |||||| ||||| ||| |||||| | | ||| | || | || | |||
Sbjct 87709 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 87767
Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191
|| || ||||| | ||||| || || ||| | || |||
Sbjct 87768 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 87807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303349258203320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |