Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq24 416 4e-111 seq10 334 1e-86 >seq24 Length=140564 Score = 416 bits (460), Expect = 4e-111 Identities = 1386/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Minus Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 88839 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 88780 Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 61962 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 88779 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 88720 Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 88719 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 88660 Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081 | ||||| |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 88659 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 88601 Query 62082 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 88600 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 88541 Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198 ||||||||| | | | || ||| |||| | | || || || || | || | Sbjct 88540 AATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAAGGGTTGACAATCTGGA 88481 Query 62199 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 62258 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 88480 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 88421 Query 62259 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62318 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 88420 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 88361 Query 62319 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62376 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 88360 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 88301 Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436 | || ||||| | ||| | || |||||| || | || Sbjct 88300 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 88243 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 || |||||||| ||| || | || |||| ||| ||||| || ||| | | |||||| Sbjct 88242 CTCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 88183 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT-A 62555 |||||| || || | |||| || || | ||||| | ||||||||| |||| | | Sbjct 88182 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 88124 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 88123 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 88064 Query 62616 TAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62672 | || || ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 88063 TTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 88007 Query 62673 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62722 || | | || ||||| | ||| |||| |||| | || || || Sbjct 88006 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 87949 Query 62723 C-CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 |||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 87948 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 87889 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 87888 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 87829 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 87828 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 87769 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 87768 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 87709 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 87708 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 87649 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 || ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 87648 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 87589 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 87588 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 87529 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 87528 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 87469 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 87468 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 87409 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | | || || | |||||||||||| ||||||||||||||||| || || | ||||| Sbjct 87408 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 87349 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 87348 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 87289 Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438 || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 87288 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 87229 Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 87228 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 87169 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63558 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 87168 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 87109 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 |||||| || || || || | ||||| | || || || |||||| | ||||| || Sbjct 87108 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCAGCAATCTTACCATT 87049 Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 87048 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 86989 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 86988 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 86929 Query 63739 AATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 63798 ||||||| || ||| | |||| ||||||||||||| | ||| | ||| | Sbjct 86928 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 86869 Query 63799 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 63858 | | |||||| ||| || |||||| || |||| ||||| | || | ||| Sbjct 86868 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 86809 Query 63859 AGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 63915 ||| || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 86808 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 86752 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || | | | || ||||| || ||||| ||||||| ||| Sbjct 86751 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 86713 >seq10 Length=365393 Score = 334 bits (370), Expect = 1e-86 Identities = 608/884 (69%), Gaps = 12/884 (1%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || ||||||||||| ||||| | || | |||| | | || ||| || | Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | ||||||||| ||||| || | ||| ||||| || |||||| || | | Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 32550 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 || || || || || |||| ||| | |||| ||||||| || || || || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 32668 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 99761 Query 32669 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 32728 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 99762 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 99821 Query 32729 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 32788 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 99822 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 99881 Query 32789 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 32845 || || ||||| || | | |||||| || | || | || | ||||| || Sbjct 99882 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 99941 Query 32846 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 | |||||| |||||||| | || | ||| || ||||| || || ||||| || | | Sbjct 99942 TAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 100001 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | |||| || |||||| | || ||||||||||| | | ||| |||||||||| Sbjct 100002 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 100061 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTT- 33024 ||||||||| || ||||| || || ||||| ||| ||||||| | ||| || || | Sbjct 100062 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 100121 Query 33025 -CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33083 || | ||| || || ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 100122 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 100179 Query 33084 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 33140 || | || | || || || |||| | | | | | || |||||||||| Sbjct 100180 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 100239 Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33200 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 100240 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 100299 Query 33201 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || | ||| || || ||||| | |||||||| | |||||| || Sbjct 100300 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629940696000