Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq10 334 8e-87
seq17 87.8 2e-12
seq35 82.4 9e-11
>seq10
Length=365393
Score = 334 bits (370), Expect = 8e-87
Identities = 552/779 (71%), Gaps = 37/779 (5%)
Strand=Plus/Plus
Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976
|| || |||||| || ||||| || | |||||| |||||||||| |||||| || ||
Sbjct 99579 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 99638
Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTACAACGGCTTCTTTC 93034
||| | |||||||| ||||| || ||| | ||||| || || |||||||||| |
Sbjct 99639 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATCTCTTT-TCAATATCAACGGCTTCGGTA 99696
Query 93035 AAGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACAT 93087
| ||||| | | || | | ||| || || | | || | || ||| | |
Sbjct 99697 ATGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAG 99749
Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147
|| || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| ||
Sbjct 99750 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 99809
Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207
|||||||| | || |||| || || | ||| || || || ||||| |||||| ||
Sbjct 99810 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 99869
Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-C 93266
|| |||||||| || || ||||||||||| | | || ||||| ||| ||| |
Sbjct 99870 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 99929
Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326
||| ||||||||||||||||| ||||| |||| ||| ||||| || | |||||| || |
Sbjct 99930 TGCA-ATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTG 99988
Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
| || |||| | | || | || | | |||| ||||| ||||| || || | |||||
Sbjct 99989 CATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAAT 100048
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
| |||| ||||| | || ||||| ||||||||| || ||||||||| |||| || |
Sbjct 100049 AAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTG 100108
Query 93447 TGATCTGCACTT--CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504
|| || || | ||||||||| |||| || | ||||||||||||||||||||| ||
Sbjct 100109 GAATTTGAACATCACTTGAGAAA--TTCTCAACTAAATTTTCATTGACTATACCATCAGA 100166
Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAG 93558
|| ||||| || || || | || | | ||||| | | |||| || || ||
Sbjct 100167 AGCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAAT 100221
Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
| || | |||||| | |||||| || ||||| | ||| || ||||||| || |||
Sbjct 100222 CTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGAT 100281
Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
|||||||| || |||||||| | ||| || || ||||| | |||||||| | |||||
Sbjct 100282 GCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 100340
>seq17
Length=202669
Score = 87.8 bits (96), Expect = 2e-12
Identities = 82/102 (80%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 136272 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 136213
Query 126328 TTCGAACCCCACACCTGACAAAT-TATTATTG--GAATTTTT 126366
||||||||||||| ||| ||||| | || ||| ||||| ||
Sbjct 136212 TTCGAACCCCACAGCTGTCAAATATTTTTTTGCTGAATTATT 136171
>seq35
Length=68242
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 44317 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 44376
Query 126328 TTCGAACCCCACACCTGACA 126347
||||||||||||| ||| ||
Sbjct 44377 TTCGAACCCCACAGCTGTCA 44396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858990202400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |