Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 190 4e-43
seq1 183 6e-41
seq115 154 3e-32
seq11 154 3e-32
>seq2
Length=717657
Score = 190 bits (210), Expect = 4e-43
Identities = 170/213 (80%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || ||||| | || || |||||
Sbjct 277367 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATC 277426
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || || || || |||||||||||||| |||||||| |||||||| ||
Sbjct 277427 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATC 277486
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| |||||| |||||| ||||||||||| | ||||| ||||| ||||| |||||
Sbjct 277487 TTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 277546
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||| || || |||||
Sbjct 277547 CTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 277579
>seq1
Length=782669
Score = 183 bits (202), Expect = 6e-41
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || ||
Sbjct 231611 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231670
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||| || || || ||||| || ||||| || ||||| |||||||| || ||||||||
Sbjct 231671 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231730
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || |||||||| | ||| || || ||||| ||||| ||
Sbjct 231731 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231790
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || || || |||||||| || |||||||||
Sbjct 231791 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCATT 231824
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || ||
Sbjct 230927 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 230986
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||| || || || ||||| || ||||| || ||||| |||||||| || ||||||||
Sbjct 230987 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231046
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || |||||||| | ||| || || ||||| ||||| ||
Sbjct 231047 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231106
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || |||||||| || ||||||||
Sbjct 231107 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || ||
Sbjct 231155 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231214
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||| || || || ||||| || ||||| || ||||| |||||||| || ||||||||
Sbjct 231215 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231274
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || |||||||| | ||| || || ||||| ||||| ||
Sbjct 231275 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231334
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || |||||||| || ||||||||
Sbjct 231335 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || ||
Sbjct 231383 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231442
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||| || || || ||||| || ||||| || ||||| |||||||| || ||||||||
Sbjct 231443 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231502
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || |||||||| | ||| || || ||||| ||||| ||
Sbjct 231503 CTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231562
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || |||||||| || ||||||||
Sbjct 231563 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595
>seq115
Length=8510
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| || || || || ||||| ||||| || || || | || || |||||
Sbjct 1923 CAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1864
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || || || || |||||||||||||| |||||||| |||||||||||
Sbjct 1863 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 1804
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | |||||| ||||| ||||| | ||| || ||||| ||||| || ||
Sbjct 1803 TTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGT 1744
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || || || || || |||||
Sbjct 1743 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1711
>seq11
Length=336598
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| || || || || ||||| ||||| || || || | || || |||||
Sbjct 4935 CAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 4994
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || || || || |||||||||||||| |||||||| |||||||||||
Sbjct 4995 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 5054
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || | |||||| ||||| ||||| | ||| || ||||| ||||| || ||
Sbjct 5055 TTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGT 5114
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || || || || || |||||
Sbjct 5115 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 5147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619404727200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |