Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 190 4e-43 seq1 183 6e-41 seq115 154 3e-32 seq11 154 3e-32 >seq2 Length=717657 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || ||||| | || || ||||| Sbjct 277367 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATC 277426 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || |||||||||||||| |||||||| |||||||| || Sbjct 277427 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATC 277486 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| |||||| |||||| ||||||||||| | ||||| ||||| ||||| ||||| Sbjct 277487 TTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 277546 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||| || || ||||| Sbjct 277547 CTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 277579 >seq1 Length=782669 Score = 183 bits (202), Expect = 6e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 231611 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231670 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 231671 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231730 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 231731 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231790 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || || |||||||| || ||||||||| Sbjct 231791 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCATT 231824 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 230927 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 230986 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 230987 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231046 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 231047 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231106 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 231107 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 231155 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231214 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 231215 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231274 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 231275 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231334 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 231335 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 231383 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 231442 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 231443 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 231502 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 231503 CTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 231562 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 231563 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595 >seq115 Length=8510 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || || || | || || ||||| Sbjct 1923 CAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1864 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || |||||||||||||| |||||||| ||||||||||| Sbjct 1863 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 1804 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | |||||| ||||| ||||| | ||| || ||||| ||||| || || Sbjct 1803 TTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGT 1744 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || || || || ||||| Sbjct 1743 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1711 >seq11 Length=336598 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || || || | || || ||||| Sbjct 4935 CAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 4994 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || |||||||||||||| |||||||| ||||||||||| Sbjct 4995 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 5054 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | |||||| ||||| ||||| | ||| || ||||| ||||| || || Sbjct 5055 TTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGT 5114 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || || || || ||||| Sbjct 5115 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 5147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619404727200