Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 132 4e-26 seq115 120 3e-22 seq11 120 3e-22 >seq2 Length=717657 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 277365 CTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCA 277424 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || ||||| | || | || ||| ||||| || ||||| ||||| ||| Sbjct 277425 TCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTA 277484 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || ||||| |||| || | |||||| ||||| || ||||| | |||| Sbjct 277485 TCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATG 277544 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| || || ||||||||||||||| Sbjct 277545 GTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATC 277580 >seq115 Length=8510 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || ||||||||||| || || || || | ||| || | Sbjct 1925 CTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 1866 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || ||||| | || | || ||| ||||| || ||||| ||||| || Sbjct 1865 TCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTG 1806 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| |||| || | ||||| || ||||||||||| | |||| Sbjct 1805 TCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATA 1746 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || |||| |||||| ||||||||||||||| Sbjct 1745 GTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATC 1710 >seq11 Length=336598 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || ||||||||||| || || || || | ||| || | Sbjct 4933 CTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 4992 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || ||||| | || | || ||| ||||| || ||||| ||||| || Sbjct 4993 TCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTG 5052 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| |||| || | ||||| || ||||||||||| | |||| Sbjct 5053 TCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATA 5112 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || |||| |||||| ||||||||||||||| Sbjct 5113 GTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATC 5148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001730989600