Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 5e-24
seq115 123 6e-23
seq11 123 6e-23
seq1 105 2e-17
>seq2
Length=717657
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| || || || |||||||||| ||||||||| | ||||| || ||
Sbjct 277364 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 277423
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| || | || ||||| || ||| |||||
Sbjct 277424 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 277483
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||||||||| || |||| |||||| | | ||| || || || || ||
Sbjct 277484 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 277543
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || |||||||||||
Sbjct 277544 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTG 277576
>seq115
Length=8510
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || ||
Sbjct 1926 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1867
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| || | || ||||| || ||| |||||
Sbjct 1866 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1807
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || |||| ||||| | || || || || || || ||
Sbjct 1806 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1747
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | |||||| |||||||||||
Sbjct 1746 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 1714
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||||||||| || || ||||| || |||||||| || |||||| | || ||||||
Sbjct 1832 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 1891
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
| || || || |||||||||||| | || ||||||
Sbjct 1892 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 1926
>seq11
Length=336598
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || ||
Sbjct 4932 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 4991
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| || | || ||||| || ||| |||||
Sbjct 4992 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 5051
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || |||| ||||| | || || || || || || ||
Sbjct 5052 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 5111
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | |||||| |||||||||||
Sbjct 5112 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 5144
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||||||||| || || ||||| || |||||||| || |||||| | || ||||||
Sbjct 5026 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 4967
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
| || || || |||||||||||| | || ||||||
Sbjct 4966 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 4932
>seq1
Length=782669
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 230924 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 230983
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 230984 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 231043
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 231044 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 231103
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 231104 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 231136
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 231152 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 231211
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 231212 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 231271
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 231272 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 231331
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 231332 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 231364
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 231380 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 231439
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 231440 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 231499
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 231500 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 231559
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 231560 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 231592
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 231608 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 231667
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 231668 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 231727
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 231728 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 231787
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 231788 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 231820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178917672717420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |