Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24 237 2e-57 >seq24 Length=140564 Score = 237 bits (262), Expect = 2e-57 Identities = 973/1509 (64%), Gaps = 45/1509 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGG 105953 |||||||||| || || || || | |||||| ||| || || || | ||||| | Sbjct 88494 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAGTGTAAG 88436 Query 105954 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 106013 ||||||||||||| || | ||| | ||||| | || || || || ||||||||||| | Sbjct 88435 GTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAA 88376 Query 106014 TCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTC 106071 | || || | | | || || || ||||||| ||||| | ||||||||| Sbjct 88375 CAAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC 88318 Query 106072 GTAGTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | ||| |||| | |||||| || || | |||||||| | Sbjct 88317 ATA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGC 88261 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA--GCCAATTCACAGCTCGCC 106186 ||||| || ||||| |||||||| | || | | ||| | |||||| || ||| Sbjct 88260 AGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTCATGGATAATTCAACACTTGCC 88203 Query 106187 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 106246 |||| | || ||||| ||||||||||| || || ||||| ||||| ||||| Sbjct 88202 TCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGC 88143 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 |||||||||| | | ||| || || |||| || | |||||| ||||| | | || Sbjct 88142 GAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCA 88083 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || ||||||| || |||||| || ||| ||||| ||||| ||||| | ||||| || Sbjct 88082 ATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTATCG 88023 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA---- 106422 |||| | || | ||||| || |||| |||||| |||||||| | || ||| | Sbjct 88022 ATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTA 87963 Query 106423 -ATCAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | ||| ||| | ||| || |||| ||| | || | || | || ||| Sbjct 87962 TACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAA 87906 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || ||||| || || || || || || || | |||||| || || |||||| Sbjct 87905 TTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAA 87846 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || |||||||| | ||| ||| || ||||| || |||||||| || | | Sbjct 87845 GATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAAC 87786 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA-CACATCGGCGGC 106656 ||| | || || || || || || || | | | || | | ||| || | | Sbjct 87785 ATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTG---- 87730 Query 106657 TGGTACAATGG--CGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAA 106713 || | ||| | | ||| | ||| | | || || || || || | ||| || Sbjct 87729 TGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAA 87670 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATT 106772 || ||||| | || | ||| |||| ||| || || |||| | || ||| | Sbjct 87669 TTCATCACCATATACATCACTCAAACCAGGTG-CTTCACTAGGGGAGAAGAAAGTCCAAT 87611 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 || | |||||| | | ||| || | || |||||||| | | | || | || Sbjct 87610 CTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAAT 87551 Query 106833 CTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 106892 |||| | | ||||| | ||| ||||| | | |||| || || | |||| Sbjct 87550 CTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATAT 87491 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 106948 | | ||||| ||||||| ||| | ||| | | || |||| | ||| |||| Sbjct 87490 CTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT-TATTACCACCTTGG 87432 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | ||||| | || ||| ||||| || | || |||||||||||| |||| ||| | Sbjct 87431 TCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTA 87372 Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068 ||||| || || |||| ||| | | | ||| | || ||| || || | ||||||| Sbjct 87371 CCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATA 87312 Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128 || ||||| || || || ||||| || | | ||| |||||||||| | || Sbjct 87311 CCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATG 87252 Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188 || || ||||| | || | | ||| || ||||| || |||||| ||||| | | Sbjct 87251 GAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAA 87192 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTC 107247 ||||| || ||||| | || || |||| |||||| | |||||| | || || || Sbjct 87191 TTGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATTATAAGTTTC 87133 Query 107248 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTG 107307 | ||||||||||| || || || || || || | ||| || | ||| | | | ||| Sbjct 87132 AATAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTG 87073 Query 107308 GGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAG 107367 ||| |||| | | |||| | | | |||||| ||| | || | ||||||| Sbjct 87072 GGGCCTTTCAGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAA 87013 Query 107368 ACCAAAGTA 107376 |||||| || Sbjct 87012 ACCAAAATA 87004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978882562400