Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 185 2e-41 seq115 179 8e-40 seq11 179 8e-40 seq1 120 7e-22 >seq2 Length=717657 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || ||||| || ||||| |||| | ||| Sbjct 277358 TCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGT 277417 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||||||||| |||||||||| ||||||||| || ||||| || Sbjct 277418 TCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACC 277477 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || ||||||||||| || || |||||||| ||| ||| ||||| | Sbjct 277478 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAA 277537 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || || || || || | |||||| Sbjct 277538 GGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 277579 >seq115 Length=8510 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || |||||||| ||||| || | | ||| Sbjct 1932 TCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGT 1873 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||||||||| |||||||||| ||||||||| || ||||| || Sbjct 1872 TCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACC 1813 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| ||||| |||||| || || || ||||| || || ||||| | Sbjct 1812 TTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAA 1753 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || |||||||| || || | |||||| Sbjct 1752 GGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1711 >seq11 Length=336598 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || |||||||| ||||| || | | ||| Sbjct 4926 TCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGT 4985 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||||||||| |||||||||| ||||||||| || ||||| || Sbjct 4986 TCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACC 5045 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| ||||| |||||| || || || ||||| || || ||||| | Sbjct 5046 TTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAA 5105 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || |||||||| || || | |||||| Sbjct 5106 GGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 5147 >seq1 Length=782669 Score = 120 bits (132), Expect = 7e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 231602 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 231661 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 231662 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 231721 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 231722 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 231781 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || ||||| | || || || || | ||||||| Sbjct 231782 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATTT 231825 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 230918 TCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 230977 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 230978 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 231037 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 231038 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 231097 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 231098 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 231146 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 231205 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 231206 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 231265 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 231266 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 231325 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 231326 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 231374 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 231433 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 231434 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 231493 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 231494 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAA 231553 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 231554 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477904039420