Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 102 5e-17 >seq1 Length=782669 Score = 102 bits (112), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | || || ||||| ||||| |||||||| Sbjct 231141 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 231200 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | || || || ||||| || || || || |||| ||||||||| | || Sbjct 231201 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 231260 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| |||||| ||||| || |||| || || | ||| Sbjct 231261 ATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT--TATCAATGGTGTCGGATGACTC 231316 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | || || ||||| || || || ||||| ||||||||||||||| Sbjct 231317 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231368 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | || || ||||| ||||| |||||||| Sbjct 231369 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 231428 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | || || || ||||| || || || || |||| ||||||||| | || Sbjct 231429 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 231488 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| ||||| | || | || | ||| || Sbjct 231489 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACC 231548 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || ||||| || || || ||||| ||||||||||||||| Sbjct 231549 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231596 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| |||||||||||||| | || || ||||| ||||| |||||||| Sbjct 231597 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 231656 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | || || || ||||| || || || || |||| ||||||||| | || Sbjct 231657 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 231716 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| |||||| ||||| || |||| || || | ||| Sbjct 231717 ATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT--TATCAATGGTGTCGGATGACTC 231772 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | || || ||||| || || || ||||| |||||||||||||| Sbjct 231773 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231823 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || || |||||||||||||| | || || ||||| ||||| |||||||| Sbjct 230913 CCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 230972 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | || || || ||||| || || || || |||| ||||||||| | || Sbjct 230973 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 231032 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| |||||| ||||| || |||| || || | ||| Sbjct 231033 ATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT--TATCAATGGTGTCGGATGACTC 231088 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | || || ||||| || || || ||||| ||||||||||||||| Sbjct 231089 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632571317280