Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10 309 4e-79 >seq10 Length=365393 Score = 309 bits (342), Expect = 4e-79 Identities = 607/888 (68%), Gaps = 17/888 (2%) Strand=Plus/Plus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 ||||| || ||| |||| |||||||||| ||||| || || | || || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 36945 TCCATAAAATCAAATGGATTAG--ATGTATTATATATAGTACTACATGATAATTCCTTCA 37002 |||||||| || |||||||| | | || |||| | | ||| |||| | ||| Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTC--ACAACCTAATGCAATCA 99580 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 | || ||||| |||||||| || | || | |||||| | || | || ||||| | | Sbjct 99581 GTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCA 99640 Query 37063 GTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACT 37121 || || || | || || ||||| | | ||||| || || || || ||| Sbjct 99641 AGTTGACAGGTAGGGCGTCAGTGAAGTA-TCTCTTTTCAATATCAACGGCTTCGGTAATG 99699 Query 37122 ATAT---TAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACAT 37178 || | | ||||| ||| || ||||| || || |||| | ||| | ||||| Sbjct 99700 ATTTGTCTGACAATTTTTTCGTC---TGGGGTATGGTTCAAATGTGAAAAGAGCAAACAA 99756 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 |||||||| |||||||||||||||||||| |||| || || || || || || ||| Sbjct 99757 GCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCT 99816 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 ||||| |||||||| ||||| | ||| || || | |||||| || ||||| ||||||||| Sbjct 99817 GGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATA 99876 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGT-ACCGAAAGTTGAACTATAATCAGAAAT 37357 |||||||| || |||||||| || | || | | | || || | | ||| | ||| Sbjct 99877 CCTTCAACAGCAGCAAATGCCACCA-ACCTCTCTGCAAACAATGCATCTTTATCTGCAAT 99935 Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 ||||||| | ||| || |||||| || | |||| |||||||||||||| || || Sbjct 99936 CCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAA 99995 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 | || | |||| | |||| | || ||||||||||| | |||| ||| |||| Sbjct 99996 TAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTC 100055 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 || ||||| ||||| || || || || ||||| ||||| |||| || | | ||| Sbjct 100056 CGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTG 100115 Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597 |||||| | | || ||| | |||| |||||||| ||||| |||||| ||| ||||| Sbjct 100116 AACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAA 100175 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTTTCCAATC 37654 ||| || ||||| | || || ||||||| || || || || |||||||| Sbjct 100176 GAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATC 100235 Query 37655 ATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTT 37714 || | |||||| || | ||||| ||| || | ||||| ||| ||| ||| || Sbjct 100236 ATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTT 100295 Query 37715 ATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 ||||| |||||| || | || | |||||||| | ||||| || Sbjct 100296 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314874970400