Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12 158 1e-33 >seq12 Length=322354 Score = 158 bits (174), Expect = 1e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 138179 TGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTT 138238 ||| |||| ||| |||||||| || ||||| ||||| ||||| ||||| || || || Sbjct 15980 TGCAACACAAATTGGACCTACACCTGGACCACCACCACCATGAGGAATGGCAAAAGTTTT 15921 Query 138239 ATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTG 138298 ||||||||| | |||||| || || ||||| | |||| ||| || |||||| || || Sbjct 15920 ATGTAAATTCAAATGACAAACGTCAGCACCTAAATCACCTGGAGATGTTAGACCAACTTG 15861 Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358 || || | ||| ||||||||||| || ||||||||||||| | |||| |||| ||| Sbjct 15860 AGCGTTCATATTAGCACCATCGAGGTAAACCTGACCACCATGTTGGTGAATAATCTCACA 15801 Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | | || ||| |||||| | ||||| ||| || ||||| |||| |||||| Sbjct 15800 AGCTTCTTTTATAGTTGGTTCAAACAGACCATAAGTTGAAGGATAAGTAACCATAAT 15744 Score = 107 bits (118), Expect = 2e-18 Identities = 182/263 (69%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 139825 TCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTT 139884 |||| || |||||| | ||| ||| || | ||| || ||||| || | | | ||| Sbjct 14286 TCTTTTTGCCTCTTGAATTGTTAAATGACAAAATCATCGCTTCTGCAGCCGACGATCCTT 14227 Query 139885 CATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGT 139944 | ||||||| ||| || || || ||||| || || || || || | | | ||||| | Sbjct 14226 CGTCTAATAAAGAAGCATTGGCGATTGGCAAGCCAGTCAGATCCGATACAACTGTTTGAT 14167 Query 139945 AATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATG 140004 |||| | || | |||||||| || ||||| | ||||||||||| || || || || | Sbjct 14166 AATTAAGTAGACTCTCCAATCTACCTTGAGAAACTTCAGCTTGATAAGGTGTATAGGAAG 14107 Query 140005 TGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCAT 140064 | ||||| ||||||||| | | |||| || || ||| | ||| | || |||| Sbjct 14106 TATACCATGCAGGATTCTCCAATAGATTTCTTTGAATAACTAGTGGTAATTTTGTACCAT 14047 Query 140065 AGTATCCTTGACC--TATAAGAC 140085 | || |||| ||| |||||||| Sbjct 14046 AATAACCTTTACCAATATAAGAC 14024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996518255200