Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq24 262 5e-65 seq5 89.7 6e-13 >seq24 Length=140564 Score = 262 bits (290), Expect = 5e-65 Identities = 917/1409 (65%), Gaps = 37/1409 (3%) Strand=Plus/Plus Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300 || || || || || || ||||||||||| | || || || | |||||| | ||| Sbjct 87100 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 87159 Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360 ||| |||| || || | ||||| || |||||| | ||||| |||||| || ||||| Sbjct 87160 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 87218 Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420 || ||| | | || | ||||| || || || | |||||||||| ||| | | Sbjct 87219 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 87278 Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480 || ||||| || || || ||||| ||||||||| | || || ||| || | || Sbjct 87279 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 87338 Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540 | | | | ||| |||| || || |||||| ||| |||| |||||||||||| | Sbjct 87339 ATCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGAT 87398 Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTC 75597 | | || ||||| ||| || | ||||| | |||| || | ||| ||| Sbjct 87399 TAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATAA-AAGACCTGGTG 87457 Query 75598 CATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGAC 75656 | | || | || | || || |||||| | ||||| | || || |||| | | Sbjct 87458 CGTTTGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGA 87517 Query 75657 TCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAG 75716 ||||| ||| | ||||| | | |||||| | || | | | |||||||| | Sbjct 87518 AAAACCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTG 87577 Query 75717 ACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAG 75775 | | || ||| | | |||||| | || | ||| || | |||| || || ||| Sbjct 87578 ATTTATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG 87637 Query 75776 GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 |||| ||| | || | ||||| || || ||| | || || || |||||| Sbjct 87638 -CACCTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAA 87696 Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894 || ||||||| || || | ||| | | ||| ||| | | || | | Sbjct 87697 AGAGAAGGTAGAGGCAGGAGAACAATTAAAGCA-CAAAAGTTATGGTATTCGATCTTAGA 87755 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 | | || || || ||||| ||||| | ||| | || |||||||| ||||||||||| Sbjct 87756 AGCTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATC 87815 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 ||| ||| | |||||||| ||||| || ||| | ||| |||||| | || || Sbjct 87816 TAATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATA 87875 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || || || || || ||||| ||||| || | || | || | ||| Sbjct 87876 TTCATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGT 87935 Query 76075 CAATGAA---GA-GACTCGCACTTTTGAT-----TATGAAAAACTTCATGAAATCACAAA 76125 |||| || ||| | ||| ||| | | ||| || | |||||||| ||||| Sbjct 87936 ---TGAAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAA 87992 Query 76126 GATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC 76185 | |||| || ||||| | || | |||| || ||||| | ||||| ||||| ||||| Sbjct 87993 GGTTGTGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGC 88052 Query 76186 GCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGT 76245 ||| || |||||| || ||||||| |||| | | ||||| |||||| | || |||| Sbjct 88053 AAGAAGATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGC 88112 Query 76246 ATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 || || ||| | | |||||||||| ||||| ||||| ||||| || || Sbjct 88113 CTTCATGATGTTGAGATTACCATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAAT 88172 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC--TGAAGCCCAA 76363 ||||||||||| ||||| || | ||||||| ||| |||||| | ||| | | Sbjct 88173 TTTTGAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCCATGAGG--GAT 88230 Query 76364 GGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATG 76423 || | |||||||| ||||| || ||||| || |||||||| | || ||||||||| | Sbjct 88231 GGACCATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTT 88290 Query 76424 TGGG--AAGGTG-AAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAG 76480 |||| ||| | |||||| || | || ||||||||| | ||||| |||||| Sbjct 88291 TGGGGTAAGAAGCCAACCAA-CTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAG 88347 Query 76481 GAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCAC 76538 | || || || | | | || || | | ||||||||||| || || || || | | Sbjct 88348 GCCAATGG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTC 88405 Query 76539 AAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAA 76598 |||| | ||| | || |||||||||||||| ||||| | || || ||| |||||| Sbjct 88406 AAATTCTAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCTAGAAGAG 88465 Query 76599 CCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | || ||||| || ||||||||| Sbjct 88466 TTTTAGCCGGTGAATTCCAGATTGTCAAC 88494 >seq5 Length=581968 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || |||||||| ||||| || || | ||| || ||||| || || || | Sbjct 333250 GGCGCAAAGATCCCTCGAGGTGCTATTTTAAATGGTCCACCCGGTACAGGTAAAACGTTA 333191 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || |||||| || || || ||| | | || |||| | | Sbjct 333190 CTTGCTAAAGCCACTGCTGGTGAAGCAGGGGTTCCGTTCTACTCTGTT-TCTGGTTCTGA 333132 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 |||||||| |||||||||||||| ||||| | | ||||| || | || | | || Sbjct 333131 ATTTGTGGAAATGTTTGTTGGTGTTGGTGCGTCACGTGTTCGTGAGTTGTTCAAGACTGC 333072 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAA--GCA- 175511 | |||||| ||||| |||||| ||| ||||||| || ||||| | || || || Sbjct 333071 AAGAGAAAATGCACCATCTATTGTTTTCGTTGATGAAATCGATGCTATCGGAAAATCCAG 333012 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | |||||| || ||||| || |||||| | || | ||||| || || Sbjct 333011 AGGAAAGGGAAGAGGTATGGGAGGTAATGATGAAAGAGAAAACACCTTAAATCAGCTTCT 332952 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 ||| |||||||| ||| | ||| | |||| ||| |||| | |||||||| Sbjct 332951 AGTCGAAATGGATGGATTTAAGTCTGACGATCATGTTGTTGTTTTTGCAGGTACTAATCG 332892 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGAT 175685 || || | | || || | || | |||||| | |||||||| || || Sbjct 332891 TGTTGACGTTTTGGACCCAGCTTTGCTAAGACCGGGTAGATTTGATCGTAAAAT 332838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567661148800