Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq10 158 2e-33
seq115 152 1e-31
seq11 152 1e-31
seq2 141 2e-28
seq1 86.0 1e-11
>seq10
Length=365393
Score = 158 bits (174), Expect = 2e-33
Identities = 368/558 (66%), Gaps = 11/558 (2%)
Strand=Plus/Plus
Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
||||| |||||||| ||||||||||| || || ||| | || | || || || ||
Sbjct 99751 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 99810
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
|| |||||||| || ||||||||||| | ||| || || |||||||| || ||| |||
Sbjct 99811 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 99870
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| ||||| || ||| |||||||| | | || || |||||| | | | ||||
Sbjct 99871 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCT 99930
Query 50001 AATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCT 50060
||||| |||| |||||| || || |||| |||||| | || || |||| || ||
Sbjct 99931 GCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCA 99990
Query 50061 TTAAAT---AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAA 50117
|| ||| |||||| |||| | || |||||||||
Sbjct 99991 TTGAATAAGAATTCA---CTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAA 100047
Query 50118 TACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCT 50177
|| |||| ||||| | |||||| ||||| || ||| || | | || |||
Sbjct 100048 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 100107
Query 50178 GAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGAT 50237
| | ||||| || |||| ||||||||||| ||| || |||||||||||
Sbjct 100108 GGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAA 100167
Query 50238 GCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATT- 50293
|| || ||||| |||| ||| | ||| || | ||||||| || || || |||
Sbjct 100168 GCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTG 100227
Query 50294 TTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTAC 50353
|||| | || ||| ||| || || | ||| | ||| || ||||| || |||||| |
Sbjct 100228 TTCCAATCATGCAA-ATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 100286
Query 50354 GGATTTTTTATACATTTG 50371
| || || ||||||||
Sbjct 100287 TGCCTTCTTGTACATTTG 100304
>seq115
Length=8510
Score = 152 bits (168), Expect = 1e-31
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | || ||||| || | ||||| || ||| || || || || ||||
Sbjct 1938 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGA-ATGTTGTAGTCAG 1880
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || |||| |||| || ||||| ||||| |||||||| | ||| ||||| |||||||
Sbjct 1879 ACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTG 1820
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| |||||| || ||||| |||| || || || || |
Sbjct 1819 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGA 1760
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
|||||| ||||| || ||||||||||| ||||||| ||| || ||||| |||
Sbjct 1759 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1707
>seq11
Length=336598
Score = 152 bits (168), Expect = 1e-31
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | || ||||| || | ||||| || ||| || || || || ||||
Sbjct 4920 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGA-ATGTTGTAGTCAG 4978
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || |||| |||| || ||||| ||||| |||||||| | ||| ||||| |||||||
Sbjct 4979 ACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTG 5038
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| |||||| || ||||| |||| || || || || |
Sbjct 5039 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGA 5098
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
|||||| ||||| || ||||||||||| ||||||| ||| || ||||| |||
Sbjct 5099 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 5151
>seq2
Length=717657
Score = 141 bits (156), Expect = 2e-28
Identities = 176/241 (73%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || || || || | |||| || || ||| |
Sbjct 277342 GTTCAATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGT 277401
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || ||||| |||| |||| || ||||| ||||| |||||||| | ||| ||||
Sbjct 277402 TGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTT 277461
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| |||||||| || || | || ||||| || | || |
Sbjct 277462 GGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAG 277521
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| ||||| ||||||| |||||||| ||||| ||||| || || | ||| || ||||| |
Sbjct 277522 AAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCT 277581
Query 192539 T 192539
|
Sbjct 277582 T 277582
>seq1
Length=782669
Score = 86.0 bits (94), Expect = 1e-11
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || | || | ||| || ||| || || ||
Sbjct 231594 ATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 231653
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| | | || || | |||||||||||| || || | |||||| || || |||
Sbjct 231654 GAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGT 231713
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || || || || |||||| || | || || || ||
Sbjct 231714 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCC 231773
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
|| || | || || ||||| || |||| ||| || | ||| ||||||||||
Sbjct 231774 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATTT 231825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984476720451000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |