Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq24 188 2e-42 seq4 113 1e-19 seq5 91.5 4e-13 >seq24 Length=140564 Score = 188 bits (208), Expect = 2e-42 Identities = 479/728 (66%), Gaps = 3/728 (0%) Strand=Plus/Minus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 ||||| ||||| |||||||| | || ||| ||||| || ||||| | || ||| Sbjct 87875 TATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTA 87816 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| ||||||| |||||||| |||| ||| | || || || || || | || || Sbjct 87815 GATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCT 87756 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || | ||| ||| | | | || |||||| | || ||| ||||| Sbjct 87755 TCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTT 87696 Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 |||||||| |||| | | | | || ||||| || |||||||| ||||| Sbjct 87695 TCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGGTGCT 87636 Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCA 155930 | | ||| | || | | |||| || ||| || | |||||||||| |||| Sbjct 87635 TCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCA 87576 Query 155931 CTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTC 155990 ||| | |||| ||| | || ||||| | || || | ||||| || ||| Sbjct 87575 GGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTC 87516 Query 155991 CGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTA 156050 | | || | || || |||||| | ||| ||||| | ||| | ||||| | Sbjct 87515 CTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCA 87456 Query 156051 CCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGC 156107 ||| || || ||||| || || ||||||| ||||| ||||| ||||| | | | Sbjct 87455 CCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATC 87396 Query 156108 ATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGA 156167 || |||||||| |||||||| || ||||| || ||| ||||| ||||||| ||| | | Sbjct 87395 ATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTA 87336 Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 | |||||| ||||||| ||||||||||| | ||| ||||| ||| ||||| || Sbjct 87335 ATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTC 87276 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 | ||||| | ||||||||||| ||||| || | ||||| | || | || ||| Sbjct 87275 AAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGAC 87216 Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347 | |||| || ||| || || | ||||| || || || | ||||| | |||||| | Sbjct 87215 ATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTC 87156 Query 156348 TTAGACAT 156355 || ||||| Sbjct 87155 TTTGACAT 87148 >seq4 Length=639611 Score = 113 bits (124), Expect = 1e-19 Identities = 327/502 (65%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | |||| ||| || || ||||| | |||||| || || Sbjct 496826 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 496767 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | | |||| | || || |||| |||||||| ||||| ||| ||| Sbjct 496766 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 496707 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027 || || |||| |||| ||||| | |||| || || || | || || Sbjct 496706 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 496655 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 | |||| ||||| ||||| |||| || || | ||| |||| | | || || || Sbjct 496654 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 496595 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || || | ||||| || || |||| ||||||| ||||||| ||||| |||||| Sbjct 496594 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 496535 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || || | |||| ||| || || |||||| ||| |||| || | || | Sbjct 496534 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 496475 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || ||||| || || || | | || |||| | ||||| || | || Sbjct 496474 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 496415 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || || |||||||||| |||| |||| | ||| | ||||| |||| Sbjct 496414 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 496355 Query 289328 CACATCCTGCTACATCAGCAAA 289349 |||| ||||| ||||||||||| Sbjct 496354 CACAACCTGCAACATCAGCAAA 496333 >seq5 Length=581968 Score = 91.5 bits (100), Expect = 4e-13 Identities = 317/486 (65%), Gaps = 13/486 (3%) Strand=Plus/Plus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933 || |||||||| || | || | | || || |||| || ||||||| | ||| Sbjct 332868 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 332927 Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 ||||||||||||||| || || ||||| | || | ||| ||||||||||| Sbjct 332928 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 332986 Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051 ||||| | | | || || ||| |||| || | |||||| ||||| |||| Sbjct 332987 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 333042 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 ||||| | | | || | ||||| ||| ||| | || || || | ||||| || | Sbjct 333043 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 333102 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170 | |||| ||||||| ||||||| |||||||||||| | || || || | ||| | || Sbjct 333103 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 333161 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 |||||| || || || | || || | || |||||||| || ||||| || | | Sbjct 333162 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 333221 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288 || | | | || || | ||||| || | ||| ||| || | || | |||| Sbjct 333222 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 333279 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 | || |||| ||| || || | ||||| |||| ||| || || |||||| || Sbjct 333280 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 333339 Query 289349 AAGTAA 289354 | |||| Sbjct 333340 ATGTAA 333345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812697007620