Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq24 188 2e-42
seq4 113 1e-19
seq5 91.5 4e-13
>seq24
Length=140564
Score = 188 bits (208), Expect = 2e-42
Identities = 479/728 (66%), Gaps = 3/728 (0%)
Strand=Plus/Minus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
||||| ||||| |||||||| | || ||| ||||| || ||||| | || |||
Sbjct 87875 TATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTA 87816
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
||||| ||||||| |||||||| |||| ||| | || || || || || | || ||
Sbjct 87815 GATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCT 87756
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810
|| | ||| ||| | | | || |||||| | || ||| |||||
Sbjct 87755 TCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTT 87696
Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870
|||||||| |||| | | | | || ||||| || |||||||| |||||
Sbjct 87695 TCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGGTGCT 87636
Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCA 155930
| | ||| | || | | |||| || ||| || | |||||||||| ||||
Sbjct 87635 TCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCA 87576
Query 155931 CTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTC 155990
||| | |||| ||| | || ||||| | || || | ||||| || |||
Sbjct 87575 GGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTC 87516
Query 155991 CGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTA 156050
| | || | || || |||||| | ||| ||||| | ||| | ||||| |
Sbjct 87515 CTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCA 87456
Query 156051 CCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGC 156107
||| || || ||||| || || ||||||| ||||| ||||| ||||| | | |
Sbjct 87455 CCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATC 87396
Query 156108 ATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGA 156167
|| |||||||| |||||||| || ||||| || ||| ||||| ||||||| ||| | |
Sbjct 87395 ATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTA 87336
Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227
| |||||| ||||||| ||||||||||| | ||| ||||| ||| ||||| ||
Sbjct 87335 ATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTC 87276
Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287
| ||||| | ||||||||||| ||||| || | ||||| | || | || |||
Sbjct 87275 AAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGAC 87216
Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347
| |||| || ||| || || | ||||| || || || | ||||| | |||||| |
Sbjct 87215 ATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTC 87156
Query 156348 TTAGACAT 156355
|| |||||
Sbjct 87155 TTTGACAT 87148
>seq4
Length=639611
Score = 113 bits (124), Expect = 1e-19
Identities = 327/502 (65%), Gaps = 10/502 (2%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|||||||| ||||| | | |||| ||| || || ||||| | |||||| || ||
Sbjct 496826 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 496767
Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969
|| | | |||| | || || |||| |||||||| ||||| ||| |||
Sbjct 496766 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 496707
Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027
|| || |||| |||| ||||| | |||| || || || | || ||
Sbjct 496706 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 496655
Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087
| |||| ||||| ||||| |||| || || | ||| |||| | | || || ||
Sbjct 496654 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 496595
Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147
||| || || | ||||| || || |||| ||||||| ||||||| ||||| ||||||
Sbjct 496594 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 496535
Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207
| || || | |||| ||| || || |||||| ||| |||| || | || |
Sbjct 496534 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 496475
Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267
|||| || ||||| || || || | | || |||| | ||||| || | ||
Sbjct 496474 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 496415
Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
||| || || |||||||||| |||| |||| | ||| | ||||| ||||
Sbjct 496414 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 496355
Query 289328 CACATCCTGCTACATCAGCAAA 289349
|||| ||||| |||||||||||
Sbjct 496354 CACAACCTGCAACATCAGCAAA 496333
>seq5
Length=581968
Score = 91.5 bits (100), Expect = 4e-13
Identities = 317/486 (65%), Gaps = 13/486 (3%)
Strand=Plus/Plus
Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933
|| |||||||| || | || | | || || |||| || ||||||| | |||
Sbjct 332868 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 332927
Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993
||||||||||||||| || || ||||| | || | ||| |||||||||||
Sbjct 332928 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 332986
Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051
||||| | | | || || ||| |||| || | |||||| ||||| ||||
Sbjct 332987 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 333042
Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111
||||| | | | || | ||||| ||| ||| | || || || | ||||| || |
Sbjct 333043 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 333102
Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170
| |||| ||||||| ||||||| |||||||||||| | || || || | ||| | ||
Sbjct 333103 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 333161
Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230
|||||| || || || | || || | || |||||||| || ||||| || | |
Sbjct 333162 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 333221
Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288
|| | | | || || | ||||| || | ||| ||| || | || | ||||
Sbjct 333222 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 333279
Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348
| || |||| ||| || || | ||||| |||| ||| || || |||||| ||
Sbjct 333280 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 333339
Query 289349 AAGTAA 289354
| ||||
Sbjct 333340 ATGTAA 333345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471812697007620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |