Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 4e-26
seq115 125 6e-24
seq11 125 6e-24
seq1 95.1 1e-14
>seq2
Length=717657
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| | || || |||||||||| || ||||| | ||||| ||| | |
Sbjct 277580 GATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTC 277521
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || ||||| || || || || ||
Sbjct 277520 TGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCA 277461
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | | |||||||| || || || | || ||| |||| | || || || ||
Sbjct 277460 ACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAA 277401
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||| ||| ||||| | || ||
Sbjct 277400 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 277353
>seq115
Length=8510
Score = 125 bits (138), Expect = 6e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
|| |||||| || ||| ||||||| |||| ||||| |||||||| | ||||| || |
Sbjct 1707 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 1766
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| ||||| | || | || || || ||||||||||| ||||| || || || ||
Sbjct 1767 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 1826
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|||||| | | |||||||| || || || | || ||| |||| |||| || ||
Sbjct 1827 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 1886
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||||||||||| || || ||||| || ||| ||||
Sbjct 1887 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 1928
>seq11
Length=336598
Score = 125 bits (138), Expect = 6e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
|| |||||| || ||| ||||||| |||| ||||| |||||||| | ||||| || |
Sbjct 5151 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 5092
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| ||||| | || | || || || ||||||||||| ||||| || || || ||
Sbjct 5091 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5032
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|||||| | | |||||||| || || || | || ||| |||| |||| || ||
Sbjct 5031 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 4972
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||||||||||| || || ||||| || ||| ||||
Sbjct 4971 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATT 4930
>seq1
Length=782669
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || ||||| || || | || || || | ||
Sbjct 231367 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231308
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 231307 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231248
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || ||||| || ||||| || | | || || || |||
Sbjct 231247 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231188
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 231187 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231141
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || ||||| || || | || || || | ||
Sbjct 231595 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231536
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 231535 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231476
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || ||||| || ||||| || | | || || || |||
Sbjct 231475 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231416
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 231415 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231369
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || ||||| || || | || || || | ||
Sbjct 231823 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231764
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 231763 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231704
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || ||||| || ||||| || | | || || || |||
Sbjct 231703 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231644
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||| ||| ||||| | || ||
Sbjct 231643 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231597
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || ||||| || || | || || || | ||
Sbjct 231139 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231080
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 231079 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231020
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || || || ||||| || ||||| || | | || || || |||
Sbjct 231019 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 230960
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
|| || ||||| ||||| || |||||||| ||| ||||
Sbjct 230959 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATT 230922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896137832800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |