Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2 122 7e-23 seq1 116 3e-21 seq115 105 5e-18 seq11 105 5e-18 >seq2 Length=717657 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||||||||| || ||||| || || ||||||||| | ||| || || Sbjct 277582 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 277523 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | | || || |||||||| ||||| ||||| | || || Sbjct 277522 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 277463 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || |||||||| | ||| ||||| || | || || | | ||| | | |||||| Sbjct 277462 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 277403 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 277402 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 277353 >seq1 Length=782669 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 231595 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231536 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || ||||| || || || || | || || ||| Sbjct 231535 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231476 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 231475 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231416 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 231415 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231369 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107554 AAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTG 107613 ||||||| || |||||||| || ||||||||||||| || || | || |||| | Sbjct 231825 AAATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCAT 231766 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||| || | | | || || ||||| || || || || | || || | Sbjct 231765 CCGACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 231706 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||||||||||| || |||||||| || ||||||| | ||| | ||||||||| Sbjct 231705 AGCAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACA 231646 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||| || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 231645 ACATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231597 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 231367 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231308 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 231307 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231248 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 231247 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231188 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 231187 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 231141 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 231139 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231080 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 231079 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231020 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 231019 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 230960 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| |||||||| |||| || Sbjct 230959 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGG 230913 >seq115 Length=8510 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| |||||||||||||| ||||||||||| || || || |||||| | ||| ||| | Sbjct 1707 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 1766 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 || ||| ||| | | || || || || || || ||||| | || || Sbjct 1767 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 1826 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 || || |||||||| | ||| ||||| || | || || | | ||| || | ||||| Sbjct 1827 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 1886 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| ||||| | ||| | || |||||||| |||| || Sbjct 1887 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 1937 >seq11 Length=336598 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| |||||||||||||| ||||||||||| || || || |||||| | ||| ||| | Sbjct 5151 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 5092 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 || ||| ||| | | || || || || || || ||||| | || || Sbjct 5091 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5032 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 || || |||||||| | ||| ||||| || | || || | | ||| || | ||||| Sbjct 5031 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 4972 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| ||||| | ||| | || |||||||| |||| || Sbjct 4971 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 4921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875536059140