Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq115 143 4e-29
seq11 143 4e-29
seq2 132 8e-26
>seq115
Length=8510
Score = 143 bits (158), Expect = 4e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| || | ||||| ||||| || || || ||||| | || || || |||
Sbjct 1712 TGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT- 1770
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| ||||| | ||||| || |||||| ||| || ||||| |||||||| || |||
Sbjct 1771 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 1830
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|||||||| || ||||||||||| |||||||| ||| |||||| || | || || ||
Sbjct 1831 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 1890
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
|| ||||| ||||| ||| | || ||||| || |||||||||| |||
Sbjct 1891 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGT 1938
>seq11
Length=336598
Score = 143 bits (158), Expect = 4e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| || | ||||| ||||| || || || ||||| | || || || |||
Sbjct 5146 TGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT- 5088
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| ||||| | ||||| || |||||| ||| || ||||| |||||||| || |||
Sbjct 5087 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 5028
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|||||||| || ||||||||||| |||||||| ||| |||||| || | || || ||
Sbjct 5027 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 4968
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
|| ||||| ||||| ||| | || ||||| || |||||||||| |||
Sbjct 4967 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGT 4920
>seq2
Length=717657
Score = 132 bits (146), Expect = 8e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || || || ||||| | || || ||| | |
Sbjct 277578 TGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCTG 277519
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | ||||| || | || || ||| ||| ||||| |||||||| || ||||
Sbjct 277518 ACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAAC 277459
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| || ||||||||||| |||||||| ||| |||||| ||| | || || || |
Sbjct 277458 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAACA 277399
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| || | || || || || |||| ||||| ||||
Sbjct 277398 TCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 277351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786163844959200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |