Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq24 255 1e-62
seq10 131 4e-25
seq11 87.8 4e-12
>seq24
Length=140564
Score = 255 bits (282), Expect = 1e-62
Identities = 584/869 (67%), Gaps = 19/869 (2%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
||||||||||||||||||| | ||| | |||| | | | | ||||| ||||
Sbjct 87002 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 87061
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|||| | || ||||| | | | | ||||| ||||||||||||| ||||||||
Sbjct 87062 CTGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 87121
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476
| ||||||||||| |||| || | | || ||| || |||| |||||| |
Sbjct 87122 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 87176
Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535
||| || || || || | || ||| || ||| || |||| || |||||| | |
Sbjct 87177 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 87235
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595
||| || || ||||| ||||||||||| |||||| || | |||||| |||| | ||||
Sbjct 87236 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 87295
Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655
| |||| |||| || ||||| | || | ||| ||||| | |||| || | |||
Sbjct 87296 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 87355
Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715
| || | || ||| | || | ||| || |||||||| | || ||||| || |||
Sbjct 87356 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 87415
Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772
|||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | |
Sbjct 87416 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 87475
Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832
| ||||||||||||||||| |||| || | || | | ||||| || || ||||
Sbjct 87476 AGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAAAGAAG 87535
Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892
|| |||||| | |||||||| ||| | |||||| | |||||||| ||| || | |
Sbjct 87536 AAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGAAAGAG 87595
Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952
|| | |||||| ||| || | | | ||| | | |||||| | |||||
Sbjct 87596 TTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAGTGATG 87655
Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011
||||||| | || || |||| | || |||||||||| |||||| | || |
Sbjct 87656 TATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAGAAGGTAGAGGCAGGA 87715
Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071
||| |||| ||| ||| | | |||| ||| | ||| | ||| |||||||||
Sbjct 87716 GAAC-AATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGAAACTGGT 87774
Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
|| |||| || || ||||| ||| ||| ||| |||||||||||| ||||| ||
Sbjct 87775 ACACCTTTCATGTTATATAAGGATGCAT-GTAACAAGAAATCTAATCAACAAAATTTGGG 87833
Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|| || ||| ||||| |||||||
Sbjct 87834 TGTTATCAAATCTTCCAATTTATGCTGTG 87862
>seq10
Length=365393
Score = 131 bits (144), Expect = 4e-25
Identities = 467/718 (65%), Gaps = 23/718 (3%)
Strand=Plus/Minus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
|| |||||||| || ||||||| ||| | ||||| ||||| | | || | |||
Sbjct 100334 CTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTC 100275
Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTG 131551
||||||| || || || ||| | |||||||| | |||||||| || ||| | |||
Sbjct 100274 TGGACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGG-AACAATAGA--TTG 100218
Query 131552 AATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGC 131605
|| ||||| ||||| | |||| | |||||| || ||||| || | ||||||
Sbjct 100217 AACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGT 100158
Query 131606 ATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAAT--TGATATTCCTGAAGTAA 131663
|| || | ||||||| | ||| |||||| ||||| || | | ||||| || | |
Sbjct 100157 ATAGTCAATGAAAATTTAGTTGAGAATTTC--TCAAGTGATGTTCAAATTCCAGAGGCTA 100100
Query 131664 CATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTAT 131723
|| ||||| || ||| | ||| |||||| || | ||||| ||||
Sbjct 100099 AATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTAT 100040
Query 131724 TGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATT---ATTTGATGCTGTAA 131780
||||||| | | | ||| || | | || || | |||| ||| |||| |
Sbjct 100039 TGATTGATACTTACATCAAAGATCCAAAGGA---AAGTGAATTCTTATTCAATGCAATTG 99983
Query 131781 ATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATT 131840
| | | | || || || | || || ||||||||| | ||||||||| |||| |
Sbjct 99982 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG 99923
Query 131841 CCGCTAATTTTTCTACA-AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| | | ||| | | || | || || |||||| |||||||||||| ||||| ||
Sbjct 99922 ATGC-ATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 99864
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| | || | ||||| ||| | || ||| | || |||||||| || | | ||
Sbjct 99863 GGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTC 99804
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTAT 132019
||||| | | || | |||||||||| || ||||| || |||||| || ||| |
Sbjct 99803 TCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTT 99744
Query 132020 AGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079
| | || ||| | || ||||| | | | | |||| | || | |||||| |||
Sbjct 99743 TCACATTTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTT 99684
Query 132080 GATATCGAGAAGGAGTTTATT-ACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136
||||| || || ||| | || || || || | ||| ||| ||| | || ||||||
Sbjct 99683 GATATTGA-AAAGAGATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAAT 99627
>seq11
Length=336598
Score = 87.8 bits (96), Expect = 4e-12
Identities = 166/241 (69%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||| | || |||||| ||| | |||||| | || || || | ||||| ||||||
Sbjct 244878 CATTTAATGGATAATGATCCGGTGTTATTCAATCGTCAGCCTTCTTTACATAAGATGTCT 244937
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTG 305426
|||||| ||| | |||||||| ||| | ||| ||||| || | ||| || |
Sbjct 244938 ATGATGTGTCACAGGGTCAAAGT--TATGCCATATTCCACATTCAGAATGAATTTATCCG 244995
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| | ||||| ||||| ||||| ||||| ||||||||||| ||||||| |||||||
Sbjct 244996 TTACATCACCTTACAATGCTGATTTCGATGGTGATGAAATGAACTTGCATGTTCCTCAAT 245055
Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGTATCAAAACTTATCATTTCTC 305546
| | | || | ||||| |||| || | ||| | || | | ||||||||||
Sbjct 245056 CTTACGAAACCAGAGCTGAACTATCCGAGCTTTGTGCGGTTCCTTTGCAGATCATTTCTC 245115
Query 305547 C 305547
|
Sbjct 245116 C 245116
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947
||||||||| |||| || | ||||||||||| |||||||| |||||| ||| ||
Sbjct 244464 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 244522
Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007
| ||| || ||||| | || |||||| || |||| ||||||||||||||| |
Sbjct 244523 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 244582
Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||||||| | ||||| || | |||||||||
Sbjct 244583 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 244616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186808846429860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |