Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 4e-25
seq2 82.4 5e-11
>seq1
Length=782669
Score = 129 bits (142), Expect = 4e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || || || ||| || || |||||||| || ||
Sbjct 231368 ACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 231427
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||| | |||| || | |||||| || || ||||| | | |||||| ||| | ||
Sbjct 231428 GAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGG 231487
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| | | |||| ||| | ||||||| ||| ||||
Sbjct 231488 AATACCCTCCTTGTCCTGGATCTTC-GACTTGACATTGTCAATGGTGTCGGATGACTCCA 231546
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| ||||||| || || |||||||||||||||
Sbjct 231547 CCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231596
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || || || ||| || || |||||||| || ||
Sbjct 231140 ACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 231199
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||| | |||| || | |||||| || || ||||| | | |||||| ||| | ||
Sbjct 231200 GAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGG 231259
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| | | |||| || | ||||||| ||| ||||
Sbjct 231260 AATACCCTCCTTGTCCTGGATCTTC-GACTTGACATTATCAATGGTGTCGGATGACTCCA 231318
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| ||||||| || || |||||||||||||||
Sbjct 231319 CCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231368
Score = 122 bits (134), Expect = 6e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||||||||| || | || ||||| || || || ||| || || |||||||| || |
Sbjct 230911 CACCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 230970
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
||||||| | |||| || | |||||| || || ||||| | | |||||| ||| | |
Sbjct 230971 AGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTG 231030
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCC 33699
| | ||| || ||||| || ||| || | ||| ||| ||||||| ||| |||
Sbjct 231031 GAATACCCTCCTTGTCCTGGATCTTCGACTTGA-CATTATCAATGGTGTCGGATGACTCC 231089
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| ||||| ||||||| || || |||||||||||||||
Sbjct 231090 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATA 231140
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || || || ||| || || |||||||| || ||
Sbjct 231596 ACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 231655
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||| | |||| || | |||||| || || ||||| | | |||||| ||| | ||
Sbjct 231656 GAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGG 231715
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| | | |||| || | ||||||| ||| ||||
Sbjct 231716 AATACCCTCCTTGTCCTGGATCTTC-GACTTGACATTATCAATGGTGTCGGATGACTCCA 231774
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| ||||| ||||||| || || ||||||||||||||
Sbjct 231775 CCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231823
>seq2
Length=717657
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || || || || ||||| |||||||| |||||
Sbjct 277352 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 277411
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || || ||||| || || ||||| || | | || || || | ||
Sbjct 277412 TAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 277471
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| || || || || || || |||| ||| | |||||| ||||| |
Sbjct 277472 AATACCTTCCTTATCTTGGATCTTTTGCTT-GACATTGTCGATGGTGTCAGAAGATTCAA 277530
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || ||||| ||||| || || ||||| || |||||
Sbjct 277531 CTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 277579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702958419200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |