Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 2e-28
seq115 114 3e-20
seq11 114 3e-20
>seq2
Length=717657
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || || || || ||||| ||| ||||||||| |
Sbjct 277571 TTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACCAT 277512
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||||||||||| ||||| || ||||| ||| || ||| ||||||||
Sbjct 277511 CGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGACT 277452
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||| || || ||||| || |||||||| || ||||| |||| |||||| |||| ||
Sbjct 277451 TATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAACATCCAAAA 277392
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| ||||| |||||| | || ||||||
Sbjct 277391 GGAATCTACCCTTCACTTGGTCTTGAGA 277364
>seq115
Length=8510
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || || || || || || ||||| || |||||||| ||||
Sbjct 1726 AAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCTGACACTATCGACAAT 1785
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || ||||| || ||||| ||| || ||| ||||||||||||||
Sbjct 1786 GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGACTTATCTTT 1845
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| || |||||||| || |||||| | || |||||| | || || || |||
Sbjct 1846 GCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCT 1905
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
||||||||| | || ||||||
Sbjct 1906 ACTCTTCACTTAGTCTTGAGA 1926
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || || | || ||||||| |||||| || ||
Sbjct 1926 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1867
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||| | ||||| || || |||||||| | ||||||
Sbjct 1866 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTG 1828
>seq11
Length=336598
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || || || || || || ||||| || |||||||| ||||
Sbjct 5132 AAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCTGACACTATCGACAAT 5073
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || ||||| || ||||| ||| || ||| ||||||||||||||
Sbjct 5072 GTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGACTTATCTTT 5013
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| || |||||||| || |||||| | || |||||| | || || || |||
Sbjct 5012 GCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCT 4953
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
||||||||| | || ||||||
Sbjct 4952 ACTCTTCACTTAGTCTTGAGA 4932
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || || | || ||||||| |||||| || ||
Sbjct 4932 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 4991
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||| | ||||| || || |||||||| | ||||||
Sbjct 4992 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTG 5030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816863059460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |