Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq24 553 2e-152 seq10 268 1e-66 seq136 84.2 3e-11 >seq24 Length=140564 Score = 553 bits (612), Expect = 2e-152 Identities = 1402/2104 (67%), Gaps = 55/2104 (3%) Strand=Plus/Minus Query 68410 AGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGT 68469 || || |||||||| || || || || |||| || ||||||||||| |||| | Sbjct 88796 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 88737 Query 68470 TTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCT 68529 || |||||| | ||| || ||||| ||||| ||||| | | | || Sbjct 88736 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 88677 Query 68530 CCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAA 68589 |||||||| || ||||| | ||||| ||||||| | || ||||| | ||||||| | Sbjct 88676 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 88617 Query 68590 ATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATA 68646 | | ||||| || | |||| ||| || || ||||| || ||| ||| || || Sbjct 88616 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 88557 Query 68647 ATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC 68706 || || || || ||||||||| | | | || ||| |||| | | || Sbjct 88556 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAA 88497 Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 || || || || || ||||| || | ||| ||||| | || ||||||||| || || Sbjct 88496 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 88437 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | |||| || | || |||||||||| ||||| ||||| ||||| ||||| Sbjct 88436 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 88377 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 || | || |||||| | ||||| | ||||||| || |||| ||| ||||| Sbjct 88376 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTA-ATG-----AATCC 88323 Query 68887 CAA--AGATCAGATGGTA--CAACATTCC--AAAGATCGTATTGTAGAATTCCGTTACTT 68940 || | || || |||| | | | || ||||||| | ||||| | || | | Sbjct 88322 CAGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGAT 88263 Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCA--GCTAGTTCACAACTTG 68998 ||| ||||| | | | || ||||| ||||| ||| ||| | || |||| ||||| Sbjct 88262 GCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCC--TCATGGATAATTCAACACTTG 88205 Query 68999 CCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTA 69058 |||| || ||| | | |||||| ||||| ||||| | |||| || || | ||||||| Sbjct 88204 CCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTG 88145 Query 69059 GACTATCGAATGGATAATGTAAA-AGAATAAATGCATCTGCCAATCCCTGAACCCCAATA 69117 | ||| ||||| |||| | || | || || ||||||||||| || || || |||| | Sbjct 88144 GCGAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 88086 Query 69118 CCGATAGGTCTATGTCTCTTATTTGAACTTT---CAGCTTCTGGAATAGGATAATAATTA 69174 | || ||||| | |||| ||||||| ||| ||| ||| || |||||| || || Sbjct 88085 GCAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTT 88029 Query 69175 ATATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAG 69233 |||| || |||||||| ||| ||| | | || || || | || | || || Sbjct 88028 CTATCGATGATTTTATTCAAGTTTTTAGTC-ACAACCTTTGTAATTTCATGTAACTTCTC 87970 Query 69234 AAAATCAAATC----GTCCATCT-ATAACA---AACATATTCAG----TGCTACAGATGC 69281 ||| | | | | || | | | || || |||| || ||| ||| ||| || Sbjct 87969 AAAGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGC 87910 Query 69282 TAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341 || ||||||||||||| || | || || ||||| | || || |||| ||| Sbjct 87909 TAAATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATT 87850 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 | |||||||| |||| |||||| |||||| || |||||||| || ||||| || Sbjct 87849 GGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATA 87790 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGACCC 69460 | || || || |||||||||||| | |||| ||| | || || | ||| ||| Sbjct 87789 TAACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTG 87730 Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTC 69518 | || || ||| | ||| | | || | ||| ||||||||| ||||||| || Sbjct 87729 T-GCTTTAATT--GTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTT 87673 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||||||||| || | |||||| ||| ||||| |||| | || | | || | ||| Sbjct 87672 GAATTCATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCA 87613 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 | |||| | || ||||| || |||||||| ||| |||||||| | ||| || | Sbjct 87612 ATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAA 87553 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 |||||| | |||| ||||||| || || ||||| | | ||| | ||| || | ||| Sbjct 87552 ATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAAT 87493 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 ||| |||||||| || || | ||||| || | | || |||| |||||| || || || Sbjct 87492 ATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTG 87433 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 || | || || |||||||||||| |||| || | ||| |||||||| ||||| ||| | Sbjct 87432 GTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGT 87373 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTAT 69878 |||||| || || | ||||||| || ||| | ||||||| ||| || || || Sbjct 87372 ACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAAT 87313 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 || || || |||| || || | |||||| |||||| || ||||| ||||| || || Sbjct 87312 ACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAAT 87253 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 | ||| || |||| || | ||||| ||||||||||| | ||| |||| Sbjct 87252 GGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGA 87193 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| || | || ||||| || || ||||| | | | || | || ||| || ||||| Sbjct 87192 ATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTC 87133 Query 70059 AATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 |||| | || || ||||| ||| |||||| || | || || | ||| | | ||| | Sbjct 87132 AATAACAGAATCAATATCATCACC-ATGAATACCAACGGCAACTCTCATTATTAAATGTT 87074 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || | ||| | | ||| ||||||| | || || || |||| | ||||| | Sbjct 87073 GGGGCCTTTCAGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGA 87014 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCT 70237 | ||||||||||| || |||||||| || ||| ||| || || || | ||| | Sbjct 87013 AACCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCG 86954 Query 70238 TATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTT 70297 || ||| || || ||| | ||| || || |||| |||||||||||| Sbjct 86953 CATTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTT 86894 Query 70298 TAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCT 70357 |||||| || ||| | ||| | | | || ||| ||| || |||||| || Sbjct 86893 TAGGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCT 86834 Query 70358 TGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG--TTG-TG 70414 | ||||| ||||| || || | ||| || || | | ||||| || ||||| | | || Sbjct 86833 TTTGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTG 86774 Query 70415 TAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGT 70474 | || ||| ||| | |||| |||||||| |||||||||| | ||||||||| || | Sbjct 86773 TCATATAAGCAGCAG---TTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCAT 86717 Query 70475 TATA 70478 ||| Sbjct 86716 CATA 86713 >seq10 Length=365393 Score = 268 bits (296), Expect = 1e-66 Identities = 596/887 (67%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || |||||||| || ||||| || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || ||||| || | | ||| |||| | | |||||| | |||| Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGC---AATC 99579 Query 39446 AAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | |||||||||||||| || | || ||||| || |||||| || | Sbjct 99580 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 99639 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTAT 39561 | || || ||||| || || || | | | ||||||| | || || ||||| || || || Sbjct 99640 AAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTTTT-CAATATCAACGGCTTCGGTAAT 99698 Query 39562 TATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 || | | || | | || || | ||| |||||| ||| | || || || Sbjct 99699 GATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGC 99758 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 || || ||||| || |||||||||| ||| | ||||| || || || | || || Sbjct 99759 AAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGG 99818 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| | ||| | |||||| | ||| || |||| ||||| || ||||| ||||| || || Sbjct 99819 CATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACC 99878 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCA 39798 ||| || || |||||||| || | |||||| | | || ||| |||| | ||||| Sbjct 99879 TTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCA 99938 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 || ||||| || || || | ||| | ||| || |||||||| || ||||| || | Sbjct 99939 TTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAA 99998 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 | | |||| | |||||| | || ||||| || || | | ||| |||| || Sbjct 99999 GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 100058 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 ||| |||||||| ||| || || || || || |||||| | || || | |||||| || Sbjct 100059 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 100118 Query 39979 CTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAA 40036 || | | ||| ||| | | ||||||||||| ||||| |||||| ||| ||||| Sbjct 100119 ATCACTTGAGAAATTCT--CAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 100176 Query 40037 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCA 40093 || || | || | ||| || || |||||| ||||| || ||||| ||| Sbjct 100177 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 100236 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 | | |||||| || | ||| | ||| || || ||||| || || || |||||||| ||| Sbjct 100237 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 100296 Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 ||||| | ||| || || |||| | |||||||| | |||||| || Sbjct 100297 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 >seq136 Length=5160 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 70269 TGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCAT 70328 ||| || || |||| |||||||||||||||||| || ||| | ||| | | | Sbjct 5145 TGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGATTAAC 5086 Query 70329 TACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGC 70388 || ||| ||| || |||||| ||| ||||| ||||| || || | ||| || || Sbjct 5085 AACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTAGCAGC 5026 Query 70389 TAGAATAGCATAGTCAGGATG--TTG-TGTAGTACAAGTAGCTGCTATTTCCGCAGCTAA 70445 | | ||||| || ||||| | | ||| || ||| ||| | |||| |||||||| Sbjct 5025 CAATACCGCATAATCTGGATGGATAGTTGTCATATAAGCAGCAG---TTTCAGCAGCTAA 4969 Query 70446 CGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||||||||| | ||||||||| || | ||| Sbjct 4968 ATTATCTAATTCGACAGTTGTAACACCATCATA 4936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906567546400