Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq10 264 9e-66 >seq10 Length=365393 Score = 264 bits (292), Expect = 9e-66 Identities = 424/601 (71%), Gaps = 20/601 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 |||||||| | |||||||| | ||||| || || |||||||||||||| || ||| | Sbjct 100343 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 100284 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812 || || || ||||| || || ||| ||||| | | ||||| || ||| |||||| Sbjct 100283 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 100225 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | ||| || | | |||| | || || || ||| | ||||| |||||||| Sbjct 100224 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 100165 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930 || || ||||||||||||||||| ||| | || | |||| | |||||| | ||| Sbjct 100164 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 100107 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || |||||| |||||||| |||||| || ||||| ||||||||||||| || Sbjct 100106 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 100047 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046 | | |||| ||||| |||||||||||| || | | ||| || || || || Sbjct 100046 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 99991 Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103 ||| || |||||| | || || || | || || || ||||| | |||||||| Sbjct 99990 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGC 99931 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | || | ||| | |||| ||| | | || || ||||| | ||| ||||| ||||| Sbjct 99930 AGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 99871 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||| || || || ||||| |||| || ||||| || || ||||||||||||| || || Sbjct 99870 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 99811 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| || || ||| | || || | |||||||| |||||| |||||||||||| || Sbjct 99810 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 99751 Query 44284 G 44284 | Sbjct 99750 G 99750 Score = 123 bits (136), Expect = 2e-23 Identities = 378/580 (65%), Gaps = 26/580 (4%) Strand=Plus/Minus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||||||||| || |||||| || ||| || || | |||||||||| || | | Sbjct 320716 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 320657 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360 || | ||| ||| ||| | || |||| ||| | || | || | || || | Sbjct 320656 CTTCCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 320598 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417 | || || || ||| ||| ||||| || ||||| ||| || | |||| | |||| Sbjct 320597 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 320538 Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477 |||| |||| |||||||| || || |||||||| || || ||||| ||| || Sbjct 320537 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 320481 Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531 | ||||| || | || |||||| ||| || | |||| | || ||||| | | Sbjct 320480 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 320422 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 | | | | || | || ||||| || | ||||||||||| | | | || | Sbjct 320421 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 320367 Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 |||||||||| | || || ||| || || | |||||||||||| | || Sbjct 320366 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 320307 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | || | || ||||| | ||| | |||||||| || || ||||| |||||||||||| Sbjct 320306 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 320247 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||| ||||| ||| || | |||| ||| | || || | | | |||||| Sbjct 320246 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 320187 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805 | ||||| |||||| || | || ||||||| || || Sbjct 320186 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 320147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454740561300