Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq10 264 9e-66
>seq10
Length=365393
Score = 264 bits (292), Expect = 9e-66
Identities = 424/601 (71%), Gaps = 20/601 (3%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|||||||| | |||||||| | ||||| || || |||||||||||||| || ||| |
Sbjct 100343 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 100284
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812
|| || || ||||| || || ||| ||||| | | ||||| || ||| ||||||
Sbjct 100283 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 100225
Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| ||| || | | |||| | || || || ||| | ||||| ||||||||
Sbjct 100224 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 100165
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930
|| || ||||||||||||||||| ||| | || | |||| | |||||| | |||
Sbjct 100164 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 100107
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
|| || |||||| |||||||| |||||| || ||||| ||||||||||||| ||
Sbjct 100106 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 100047
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046
| | |||| ||||| |||||||||||| || | | ||| || || || ||
Sbjct 100046 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 99991
Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103
||| || |||||| | || || || | || || || ||||| | ||||||||
Sbjct 99990 TGCAATTGAAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGC 99931
Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163
| || | ||| | |||| ||| | | || || ||||| | ||| ||||| |||||
Sbjct 99930 AGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 99871
Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
||| || || || ||||| |||| || ||||| || || ||||||||||||| || ||
Sbjct 99870 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 99811
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
|||||| || || ||| | || || | |||||||| |||||| |||||||||||| ||
Sbjct 99810 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 99751
Query 44284 G 44284
|
Sbjct 99750 G 99750
Score = 123 bits (136), Expect = 2e-23
Identities = 378/580 (65%), Gaps = 26/580 (4%)
Strand=Plus/Minus
Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301
||||||||| || |||||| || ||| || || | |||||||||| || | |
Sbjct 320716 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 320657
Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360
|| | ||| ||| ||| | || |||| ||| | || | || | || || |
Sbjct 320656 CTTCCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 320598
Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417
| || || || ||| ||| ||||| || ||||| ||| || | |||| | ||||
Sbjct 320597 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 320538
Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477
|||| |||| |||||||| || || |||||||| || || ||||| ||| ||
Sbjct 320537 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 320481
Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531
| ||||| || | || |||||| ||| || | |||| | || ||||| | |
Sbjct 320480 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 320422
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
| | | | || | || ||||| || | ||||||||||| | | | || |
Sbjct 320421 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 320367
Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
|||||||||| | || || ||| || || | |||||||||||| | ||
Sbjct 320366 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 320307
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| || | || ||||| | ||| | |||||||| || || ||||| ||||||||||||
Sbjct 320306 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 320247
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||| ||||| ||| || | |||| ||| | || || | | | ||||||
Sbjct 320246 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 320187
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805
| ||||| |||||| || | || ||||||| || ||
Sbjct 320186 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 320147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454740561300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |