Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq24 250 3e-61
seq5 89.7 6e-13
>seq24
Length=140564
Score = 250 bits (276), Expect = 3e-61
Identities = 916/1412 (65%), Gaps = 43/1412 (3%)
Strand=Plus/Minus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
||||||||| || ||||| || | |||||| ||| || || | ||||| ||
Sbjct 88494 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGG 88435
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
|||||||||||| || | ||| | ||||| | || || || || ||||||||||| |
Sbjct 88434 TTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAAC 88375
Query 110788 CA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845
| || || | | | || || || ||||||| ||||| | |||||||||
Sbjct 88374 AAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 88317
Query 110846 TAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902
|| | || |||||| | ||| |||| | |||||||| || | |||||||| ||
Sbjct 88316 TA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCA 88260
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA--GCCAATTCACAGCTCGCCT 110960
||||| || ||||| || ||||| | || | | ||| | |||||| || ||||
Sbjct 88259 GGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTCATGGATAATTCAACACTTGCCT 88202
Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020
||| | || ||||| ||||||||||| || || ||||| ||||| ||||| |
Sbjct 88201 CCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCG 88142
Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080
||||||||| | | ||| || || |||| || | |||||| ||||| | | |||
Sbjct 88141 AATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAA 88082
Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140
| ||||||| || |||||| || ||| ||||| ||||| ||||| | ||||| || |
Sbjct 88081 TTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGA 88022
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA----- 111195
||| | || | ||||| || |||| |||||| |||||||| | || ||| |
Sbjct 88021 TGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTAT 87962
Query 111196 ATCAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 111251
| ||| ||| | ||| || |||| ||| | || | || | || ||||
Sbjct 87961 ACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAAT 87905
Query 111252 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAAC 111311
| ||||| || || || || || || || | |||||| ||||| ||||||
Sbjct 87904 TACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAG 87845
Query 111312 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCA 111371
|| || |||||||| | ||| ||| |||||||| || |||||||| || | ||
Sbjct 87844 ATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACA 87785
Query 111372 TGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCT 111430
|| | || || || || || || || | || | || | | ||| ||| | | |
Sbjct 87784 TGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTG----T 87729
Query 111431 GGTACAATGG--CGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAAC 111487
| | ||| | | ||| | ||| | | || || || || || | ||| ||
Sbjct 87728 GCTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAAT 87669
Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTG 111546
|| ||||| | || | ||| |||| ||| || || |||| | || ||| |
Sbjct 87668 TCATCACCATATACATCACTCAAACCAGGTG-CTTCACTAGGGGAGAAGAAAGTCCAATC 87610
Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606
|| || |||||| | | ||| || | || |||||||| | | | || | |||
Sbjct 87609 TTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATC 87550
Query 111607 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666
||| | | ||||| | ||| ||||| | | |||| || || | |||||
Sbjct 87549 TCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATC 87490
Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 111722
| ||||| ||||||| ||| | ||| | | || |||| | ||| |||| |
Sbjct 87489 TGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT-TATTACCACCTTGGT 87431
Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 111782
||||| | || ||| ||||| || | || |||||||||||| |||| ||| ||
Sbjct 87430 CAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTAC 87371
Query 111783 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 111842
|||| || || |||| ||| | | | ||| | || ||| || || | ||||||||
Sbjct 87370 CATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATAC 87311
Query 111843 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 111902
| ||||| || || || ||||| || | | ||| |||||||||| | || |
Sbjct 87310 CACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGG 87251
Query 111903 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 111962
| || ||||| | || | | ||| || ||||| || |||||| ||||| | ||
Sbjct 87250 AATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAAT 87191
Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCC 112021
|||| || ||||| | || || |||| |||||| | |||||| | || || ||
Sbjct 87190 TGAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATTATAAGTTTCA 87132
Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053
| ||||||||||| || || || || || ||
Sbjct 87131 ATAACAGAATCAATATCATCACCATGAATACC 87100
>seq5
Length=581968
Score = 89.7 bits (98), Expect = 6e-13
Identities = 271/414 (65%), Gaps = 5/414 (1%)
Strand=Plus/Plus
Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503
|| || |||||||| | |||||| | || | || || | | || || ||||||
Sbjct 332838 ATTTTACGATCAAATCTACCCGGTCTTAGCAAAGCTGGGTCCAAAACGTCAACACGATTA 332897
Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAAT 11563
|| | |||| ||| |||| | ||| | ||| |||||||| ||| || |
Sbjct 332898 GTACCTGCAAAAACAACAACATGATCGTCAGACTTAAATCCATCCATTTCGACTAGAAGC 332957
Query 11564 TGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGT-TGC-- 11620
||||| | || | |||||| |||||||| || |||||| | | | | | ||
Sbjct 332958 TGATTTAAGGTGTTTTCTCTTTCATCATTACCTCCCATACCTCTTCCCTTTCCTCTGGAT 333017
Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680
|| || | ||||| || ||||||| ||| |||||| ||||| |||||| | || |
Sbjct 333018 TTTCCGATAGCATCGATTTCATCAACGAAAACAATAGATGGTGCATTTTCTCTTGCAGTC 333077
Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740
| || | || ||||| | | ||||| |||||||||||||| |||||||| | |
Sbjct 333078 TTGAACAACTCACGAACACGTGACGCACCAACACCAACAAACATTTCCACAAATTCAGAA 333137
Query 11741 GCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799
|||| || | | ||| || || || |||||| || ||||| || || | ||
Sbjct 333138 CCAGA-AACAGAGTAGAACGGAACCCCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGT 333196
Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
|| || ||||| || ||| | || || ||||| |||||||| || ||
Sbjct 333197 TTTACCTGTACCGGGTGGACCATTTAAAATAGCACCTCGAGGGATCTTTGCGCC 333250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029958896000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |