Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq24 214 2e-50 seq10 104 3e-17 >seq24 Length=140564 Score = 214 bits (236), Expect = 2e-50 Identities = 688/1051 (65%), Gaps = 34/1051 (3%) Strand=Plus/Minus Query 117840 AGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAAC 117899 ||||| ||||| || ||||||||||||| |||||| |||| | |||||| || | || Sbjct 88796 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 88737 Query 117900 TTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 || | |||||| ||| || || ||||||| ||| || ||||| | | | Sbjct 88736 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 88677 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || | ||| || |||||||| || | ||| | ||| ||||| |||||| | || Sbjct 88676 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 88617 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 | || ||| || || | || |||| | | || || || || ||| | || Sbjct 88616 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 88557 Query 118080 ATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAG 118135 || | | |||||| || || |||||| || || | | ||| ||| || | Sbjct 88556 ATATGGTTTTTCATAGAATCATT---CCAGAGTCCCATTTCAACCAAATCTCTCAAC-AT 88501 Query 118136 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 118194 || ||||||| || ||||| || | | ||| ||| || ||||||| | Sbjct 88500 ATAAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAG 88442 Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254 |||| || |||||||| || |||| ||| | ||||| | ||| || || || ||||| | Sbjct 88441 TGTAAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTG 88382 Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314 |||| | || | || | | ||| || || | || ||||| | | |||| Sbjct 88381 GTGCAACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 88322 Query 118315 AGTCGTAGTTGAGCT--TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 |||| || | || | ||| || | ||| | ||||||||| |||| ||||||||| Sbjct 88321 AGTCATA--TAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGA 88264 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAATTCGGAGCTC 118430 || || ||||| ||||| ||||||||||| || || |||| | ||||| || Sbjct 88263 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATC--CCTCATGGATAATTCAACACTT 88206 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 ||||| | || || ||||| || ||||||||||| || ||||| | |||| || || Sbjct 88205 GCCTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCT 88146 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||| | | || ||| || || |||| || | |||||||||||| | Sbjct 88145 GGCGAATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACA 88086 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 ||||||| | | ||||||||| || | | || || || || ||||| | || ||| Sbjct 88085 GCAATTGGTCTGTTTCTCATATTTGATCTTCTTGCAGTTTCAACAGGATAGTAGTTTCTA 88026 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC---G 118667 ||||| | |||| | ||||| || ||||||||||| |||||||| | ||| || | Sbjct 88025 TCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAG 87966 Query 118668 TAAT--CAAAACTGCGAGTC-TC---TTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 | || ||| | | | ||| || |||| ||| | ||| | || | || Sbjct 87965 TTATACCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCT 87909 Query 118722 AGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | |||||| || | || || || | || | || || | |||||| ||| || | Sbjct 87908 AAATTACAAACTGCTGTTTCCTCAGGTGAT--GAATATTCAACAATTTCACAGCATAAAT 87851 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | ||| || || ||||| || | |||||| || || ||||||| |||||||| | Sbjct 87850 TGGAAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTAT 87791 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 | | |||| | || || || || || ||||| Sbjct 87790 ATAACATGAAAGGTGTACCAGTTTCAGTTTG 87760 >seq10 Length=365393 Score = 104 bits (114), Expect = 3e-17 Identities = 326/493 (66%), Gaps = 19/493 (4%) Strand=Plus/Plus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 || || || || ||||| || ||||||||| | ||| | ||| ||||||||||| || Sbjct 99790 ATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATG 99849 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168 | |||||| ||||||||||| || || || ||| || || || | | | ||| Sbjct 99850 GATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCT 99909 Query 130169 GCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGAT 130227 ||||| | | |||| | | ||| ||| || | ||||| | ||||||| || ||| Sbjct 99910 GCAAA-CAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCCTTGAT 99968 Query 130228 ACACGGGACGGTCTGGATCGC-TTCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGAT 130284 ||| |||| || | || || || | |||| ||| |||| || |||||||||||| Sbjct 99969 ACATGGGATTGTTTCAATTGCATTGAATAAGAATTC--ACTTTCCT-TTGGATCTTTGAT 100025 Query 130285 GTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTT-CATTATGGCACTGAT 130343 ||| |||| || | | ||||| ||||| ||| | ||| ||| || || Sbjct 100026 GTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCAT-AATTTGGA 100084 Query 130344 ACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATAT 130403 || | |||||| | || || || || || ||| || ||||| | | | || Sbjct 100085 ACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTCTCAACTAAAT 100144 Query 130404 TCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA---TATACTTTATGAATT 130460 | ||| || || ||||| || ||||||| ||||| || | | | | | |||| Sbjct 100145 TTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATC 100204 Query 130461 TCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCT 130517 | |||||| ||||||| | ||||| || | | ||| || |||||||| | | Sbjct 100205 T---TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTT 100261 Query 130518 CCTCCGCAGTCCA 130530 ||||||||||||| Sbjct 100262 CCTCCGCAGTCCA 100274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433190085600