Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq24 316 2e-81 seq10 100 3e-16 >seq24 Length=140564 Score = 316 bits (350), Expect = 2e-81 Identities = 1180/1826 (65%), Gaps = 39/1826 (2%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||||| | | | | ||||||||| ||||||| | || | ||| |||||| | | Sbjct 86986 AGAGACTTCAATTATAACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGA 87045 Query 104198 CTCGATGGTGTC-TTGATGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGT 104254 | ||||| ||| || || ||| || |||| | | ||| | || ||| | ||| Sbjct 87046 ATAAATGGTAAGATTGCTGAAAGGCCC-CA--ACATTTAATAATGAGAGTTGCCGTTGGT 87102 Query 104255 ATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTAT 104313 |||||||| || || ||||||||||| | || || || | |||||| | |||||| Sbjct 87103 ATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGGTAT 87162 Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 |||| || || | ||||| || |||||| | ||||| |||||| |||||||| Sbjct 87163 -TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTC 87221 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 || ||| | | || | ||||| || || || | |||||||||| ||| | | || Sbjct 87222 ATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGA 87281 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 104493 ||||| || || || ||||| ||||||||| | || || ||| || | ||| | Sbjct 87282 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC 87341 Query 104494 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 104553 | | ||| |||| || || |||||| ||| |||| |||||||||||| || | Sbjct 87342 AACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAG 87401 Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTA 104609 || ||||| ||| || | ||||| | |||| ||| | |||| || | Sbjct 87402 GGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATA-AAAGACCTGGTGCGT 87460 Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 | ||| | ||| ||||||| ||||| | ||||| | || || |||| | | | Sbjct 87461 TTGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAA 87520 Query 104670 ACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729 |||| ||| | || || | | ||| | ||| | ||| | |||||||| ||| Sbjct 87521 ACCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATT 87580 Query 104730 TCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCA 104788 | || ||| | ||||||||| | | || ||||| || |||| | || || ||| || Sbjct 87581 TATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG-CA 87639 Query 104789 CCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAA 104848 |||||| | |||| ||||| || || ||| | || || || || || | Sbjct 87640 CCTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGA 87699 Query 104849 GAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCT 104908 |||||| | | | || | ||| | | ||| | | || | | || Sbjct 87700 GAAGGTAGAGGCAGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCT 87759 Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968 ||||| || ||||||||||| | |||| | || || || || |||||| | || |||| Sbjct 87760 CAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTAAT 87819 Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028 ||| | ||||||||||| ||||| ||||||| | || ||||| | |||| | || Sbjct 87820 CAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATTCA 87879 Query 105029 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 105088 || || || || || ||||| | || | || | || | ||| || Sbjct 87880 TCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTGAA 87939 Query 105089 CCAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 || ||||| || ||| | | ||| || | || ||| |||| || ||| Sbjct 87940 AGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTGTG 87999 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202 || |||||| | || | | | || |||||||| | || || ||||| ||||| | | | Sbjct 88000 ACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGAAGA 88059 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 || ||||||||| || | ||||||| | | ||||| || ||| | || |||| ||||| Sbjct 88060 TCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCATG 88119 Query 105263 CT-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGA 105321 | ||| || |||||||||| ||||| |||||| | ||| | || ||||| Sbjct 88120 ATGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTTGA 88178 Query 105322 GACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCA--GAGGTTGATGGTCCA 105379 ||||| ||||| || ||| | ||||| ||| || || | |||| ||||| ||| Sbjct 88179 AACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCCATGAGG--GATGGACCA 88236 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG-- 105437 ||||| || ||||| || ||||| || || ||||| | || || |||||| | |||| Sbjct 88237 TATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGGGT 88296 Query 105438 AAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGG 105497 ||| | | | | ||| || |||||||| | | ||||| ||||||| || | Sbjct 88297 AAGAAGCCAACCAACTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAATG 88354 Query 105498 GTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGG 105557 || | | || | || | || |||||||| || || || || | ||||| | | Sbjct 88355 GTTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTCTAG 88414 Query 105558 GTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCG 105616 || | || |||||||||||||| ||||| | || || || ||| |||||| | || Sbjct 88415 GTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTTAGCC 88473 Query 105617 GGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 105676 || || || |||||||||| || | || || | || || || |||||| Sbjct 88474 GGTGAATTCCAGATTGTCAACCCTTATATGTTGAGAGATTTGGTTGAAATGGGACTCTGG 88533 Query 105677 TCCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTG 105733 || || |||||| | | || | || |||||| ||||| || | | Sbjct 88534 ---AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTTACCG 88590 Query 105734 GATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGAT 105793 ||||||| | || || ||| | || || || || ||||| ||| | ||| Sbjct 88591 AATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACA 88650 Query 105794 GTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTC 105853 | || || ||||| || ||| | ||| | | | ||||| ||| |||||| || Sbjct 88651 ATTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATC 88710 Query 105854 TTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 105913 || ||| |||||| ||| || | | || ||||| | || ||||||||||| Sbjct 88711 CATTTGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAG 88770 Query 105914 GGTCTCAAAACGGGGATGTATTACCT 105939 || ||||| || || ||||||||||| Sbjct 88771 GGGCTCAAGACAGGTATGTATTACCT 88796 >seq10 Length=365393 Score = 100 bits (110), Expect = 3e-16 Identities = 340/515 (66%), Gaps = 20/515 (4%) Strand=Plus/Minus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAG 94788 ||||| | || ||||| | | || || || |||||| | || ||| ||| | | |||| Sbjct 99982 AAACAATCCCATGTATCAAGGAAAAGGCCGAATGGGCTTTAAAATGGATTGCAGATAAAG 99923 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || || ||||| ||| | | | |||||||| |||||| ||||| ||||||||| Sbjct 99922 ATGCATTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 99864 Query 94849 GGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||||| || ||| | || | ||| | || ||| ||||| | ||||||||| | || Sbjct 99863 GGTTCATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTT 99805 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTT 94965 |||||||||||| || | | | || || || | || || ||||| | | | ||| Sbjct 99804 CTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTT 99745 Query 94966 TTCAAATTATTGCGTATTAAACCA-ACGACTGAGACTATTCATTC-TATTGTTAAGGAAG 95023 |||| || ||| || ||| |||| | | | ||| | || ||| |||| Sbjct 99744 TTCACAT--TTGAACCATACCCCAGACGA--AAAAATTGTCAGACAAATCATTACCGAAG 99689 Query 95024 CCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGA 95083 ||||||| ||||| || ||| | | || ||||| || | | ||||||||| Sbjct 99688 CCGTTGATATTGAAAAGAGATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGA 99629 Query 95084 ATTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGA-AGCAGATC 95142 || || |||| | | ||| | |||| ||| | |||||| | ||| || || Sbjct 99628 ATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGC--ATT 99571 Query 95143 GGGGTGCCTCCAA---TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGC 95199 || || | || | | || | |||||||| ||||| |||||||||||| | Sbjct 99570 AGGTTG--TGAAAAGGTATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCC 99513 Query 95200 CTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234 || | || || |||||||| ||||||||||| || Sbjct 99512 CTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 99478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258904402400