Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 1e-11 >seq4 Length=639611 Score = 84.2 bits (92), Expect = 1e-11 Identities = 196/288 (68%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 65093 CCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCC 65152 ||||| ||||| ||| | |||||||||||||| || ||||||| ||||| ||| || Sbjct 232359 CCAAAACCACCATGTGGAACCAATAAATTAATATTATTAGAACCAACAAAATCCTGTGCT 232418 Query 65153 ATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGA 65211 | || ||||| | |||| ||| || ||||||||||| ||||| | |||||| | Sbjct 232419 AAACCAATAATCGATTGCA-TTAGGGATGCATCACCGTGATGGTATCCAGTATGTTCGGC 232477 Query 65212 GACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA-G 65270 | || || ||||| | ||||| ||||| | || || |||| | ||| | Sbjct 232478 AATGTAACCTTCTAATTGCGAGACTTTAATTTCGTCCCTCAAGTTACGTTTATA-GCATG 232536 Query 65271 AATACAATAT-TTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTG 65329 ||| | || |||| | |||| || || |||||||| | | || |||| |||| Sbjct 232537 CATAGAGAATCTTTCTTTGAACT-GGCTTGAACCCATCCATAACAGAAGCAATGGATCTG 232595 Query 65330 TCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCT 65377 | |||| | ||||| | || |||||||| ||||| |||||| Sbjct 232596 ACGTTATCAGCCATAGAGAAGAGGATTAATTCTTTATTAATGAATTCT 232643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679253189000