Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq24 105 7e-18 seq10 87.8 2e-12 >seq24 Length=140564 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 ||||||| | || ||| || |||||||| | || |||| | || || ||| || Sbjct 88607 TCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACAATTATCGATATGGCTG 88666 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 ||||| | ||||| ||| | || ||||| || ||| |||||||| || | ||||| Sbjct 88667 CTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATCCATTTGAAAAATCCAA 88726 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 || ||| || || | || ||||| || || || ||||||||||| |||||||| |||| Sbjct 88727 CAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAGGGGCTCAAGACAGGTA 88786 Query 55908 TGTACTATCTGCGGACCC 55925 |||| || || | |||| Sbjct 88787 TGTATTACCTTAGAACCC 88804 >seq10 Length=365393 Score = 87.8 bits (96), Expect = 2e-12 Identities = 365/575 (63%), Gaps = 6/575 (1%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||| | |||| || || || |||| | || Sbjct 99757 GCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCT 99816 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | || | ||| |||||||| ||||||| || |||||| |||||| || Sbjct 99817 GGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATA 99876 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAA---GTCATC 74927 ||||| ||| ||||| || || | | | || ||| |||||| | | ||| Sbjct 99877 CCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATC 99936 Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAG 74987 || | ||||||||| || ||| |||| |||| || || || || | ||| Sbjct 99937 CATTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAAT 99996 Query 74988 AGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCC 75047 | | | | | || | ||||| |||| | | ||||||| | || || || ||| Sbjct 99997 AAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCC 100056 Query 75048 GAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGT 75107 |||||||| || | | ||| || | |||||| | ||||||| ||| || Sbjct 100057 GAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGA 100116 Query 75108 ACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAA 75167 ||||| |||| |||||| | | ||| || |||| || || || || || || || Sbjct 100117 ACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 100176 Query 75168 AAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGTCCCAATCC 75224 || || || || || || ||| | |||| || | | | |||| |||||| Sbjct 100177 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 100236 Query 75225 TTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTG 75284 | || || | | |||||| ||||| | ||||||||| | ||||| ||| Sbjct 100237 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 100296 Query 75285 TACAAAGACCACAAGTCAGGGTAATTGATTGGAAA 75319 |||| ||| | || | || ||||||||||| Sbjct 100297 TACATTTGCCAAATTTCGTGATACTTGATTGGAAA 100331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214221548000