Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 6e-32
seq115 136 5e-27
seq11 136 5e-27
seq2 127 2e-24
seq10 95.1 1e-14
seq24 82.4 9e-11
>seq1
Length=782669
Score = 152 bits (168), Expect = 6e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||||||||| || || ||||| || || || | ||||| ||||||
Sbjct 231824 AATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATC 231765
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||||| ||| | ||| | || || |||||||||||||| ||||| ||||||||
Sbjct 231764 CGACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCA 231705
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || ||||| |||||||| ||||| ||||| | | | || || | ||||| ||
Sbjct 231704 GCAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAA 231645
Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| || || || ||
Sbjct 231644 CATCCAGAAGGAGTCGACGCTCCA 231621
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || ||||| || || || | ||||| ||||||
Sbjct 231139 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231080
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || || |||||||||||||| ||||| |||||||||
Sbjct 231079 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231020
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| |||||||| ||||| ||||| | | | || || | ||||| ||
Sbjct 231019 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 230960
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| || || || ||
Sbjct 230959 ATCCAGAAGGAGTCGACGCTCCA 230937
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || ||||| || || || | ||||| ||||||
Sbjct 231367 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231308
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || || |||||||||||||| ||||| |||||||||
Sbjct 231307 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231248
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| |||||||| ||||| ||||| | | | || || | ||||| ||
Sbjct 231247 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231188
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| || || || ||
Sbjct 231187 ATCCAGAAGGAGTCGACGCTCCA 231165
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || ||||| || || || | ||||| ||||||
Sbjct 231595 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 231536
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || || |||||||||||||| ||||| |||||||||
Sbjct 231535 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 231476
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| |||||||| ||||| ||||| | | | || || | ||||| ||
Sbjct 231475 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 231416
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| ||||| || || || ||
Sbjct 231415 ATCCAGAAGGAGTCGACGCTCCA 231393
>seq115
Length=8510
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||||||||| | || || |||||| |
Sbjct 1711 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 1770
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| ||||||| || |||||||| || ||||| || |||||
Sbjct 1771 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 1830
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 1831 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 1890
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 1891 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 1923
>seq11
Length=336598
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| || || | || || ||||||||||| | || || |||||| |
Sbjct 5147 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 5088
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| ||||||| || |||||||| || ||||| || |||||
Sbjct 5087 GACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 5028
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 5027 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAAC 4968
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 4967 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 4935
>seq2
Length=717657
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| | ||||| ||||| ||||| | || ||||| || |
Sbjct 277579 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 277520
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| || || || || ||||| || ||||| || |||||
Sbjct 277519 GACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAA 277460
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || ||||| ||||||||| | || |||| | | || || | ||||| ||
Sbjct 277459 CAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAAC 277400
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || ||||| | ||||||
Sbjct 277399 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTG 277367
>seq10
Length=365393
Score = 95.1 bits (104), Expect = 1e-14
Identities = 285/428 (67%), Gaps = 18/428 (4%)
Strand=Plus/Minus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| ||| ||||| |||||||| ||||| ||||| || || |||||| |
Sbjct 99896 GCATTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTG 99837
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|||||| | || ||||||||||| || |||| || ||||||||||| | | | || ||
Sbjct 99836 AAAAAGAGAGGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAA 99777
Query 64846 GGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCAC 64903
|| | || || ||||| | || | || |||| || | || || ||| ||
Sbjct 99776 GGTTTACATACCGATTTTGCTTGTTTGCTCTTTTCA--CATTTGAA--CCATACC-CCAG 99722
Query 64904 ATGGGACTATAAT-TGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTCATTA 64960
| | | || | || | | | | || || || || ||||||||| || | | |
Sbjct 99721 ACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAGATACTTCA 99662
Query 64961 CTGCCGCGCTTCCGTGTCGTC-TCATCGGCATGGATGCCGATAAGATGAAACAGTATATC 65019
||| ||| || || |||| | | |||| ||| || ||| |||| |||||| ||
Sbjct 99661 CTGACGCCCTACC-TGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTC 99603
Query 65020 GAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATT---AAGCCCTACTGGAATTCT 65076
|| ||||| |||||| | || || | | || ||| | ||| ||| || | |
Sbjct 99602 GAGTTTGTTGCAGATAGACTACTGATTGCATTAGGTTGTGAAAAGGTATAC--GACGT-T 99546
Query 65077 TCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAA 65136
|||||||||| |||| ||||||| || ||| | || || || |||||||| |||
Sbjct 99545 ACAAATCCATTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAA 99486
Query 65137 AAGAGGGT 65144
||||| ||
Sbjct 99485 AAGAGAGT 99478
>seq24
Length=140564
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
|| || ||||| || |||||||| ||||||||||| || || | ||||| || | |
Sbjct 88796 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 88737
Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163
|| | | ||| || || | || |||||||| ||| || |||||| | | | ||
Sbjct 88736 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 88677
Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216
|| | ||| || ||||| || ||||||| |||||| | || ||||| || ||
Sbjct 88676 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGT 88624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308546491200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |