Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2 161 2e-34
seq115 136 9e-27
seq11 136 9e-27
seq1 131 4e-25
>seq2
Length=717657
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| || || || ||||||||||| || || | | || || ||
Sbjct 277364 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 277423
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| ||||| |||||||| | |||||||||||| |||| ||||||||
Sbjct 277424 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 277483
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||||||||| || || || |||||||||||||| |||||| || | || ||
Sbjct 277484 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 277543
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | ||||| ||||| | ||||| ||
Sbjct 277544 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCTT 277582
>seq115
Length=8510
Score = 136 bits (150), Expect = 9e-27
Identities = 162/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| || || ||||| ||||| || || | | || || ||
Sbjct 1926 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1867
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| ||||| |||||||| | |||||||||||| |||| ||||||||
Sbjct 1866 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1807
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || || || || ||||| |||||||| || || || | || ||
Sbjct 1806 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1747
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || | ||| || ||||| | ||||| |||
Sbjct 1746 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1707
>seq11
Length=336598
Score = 136 bits (150), Expect = 9e-27
Identities = 162/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| || || ||||| ||||| || || | | || || ||
Sbjct 4932 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 4991
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| ||||| |||||||| | |||||||||||| |||| ||||||||
Sbjct 4992 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 5051
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| || || || || ||||| |||||||| || || || | || ||
Sbjct 5052 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 5111
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || | ||| || ||||| | ||||| |||
Sbjct 5112 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 5151
>seq1
Length=782669
Score = 131 bits (144), Expect = 4e-25
Identities = 163/222 (73%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| || |||||||| || |||| || ||||| || || || || ||
Sbjct 231620 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 231679
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||| ||||| | || ||||| || |||| || |||||||||||||||||
Sbjct 231680 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 231739
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||| || || ||||| | ||||| || || || ||
Sbjct 231740 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 231799
Query 211091 GAGAGTCTTTACAAACACCTGCATTT-TATGGTTACTTGATG 211131
|| ||||| ||||| | |||||||| ||| ||| || |||
Sbjct 231800 TAGTGTCTTGACAAAGATCTGCATTTCTATAGTTGGTTTATG 231841
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| || |||||||| || |||| || ||||| || || || || ||
Sbjct 230936 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 230995
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||| ||||| | || ||||| || |||| || |||||||||||||||||
Sbjct 230996 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 231055
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||| || || ||||| | ||||| || || || ||
Sbjct 231056 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 231115
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | ||||||
Sbjct 231116 TAGTGTCTTGACAAAGATCTGCAT 231139
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| || |||||||| || |||| || ||||| || || || || ||
Sbjct 231164 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 231223
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||| ||||| | || ||||| || |||| || |||||||||||||||||
Sbjct 231224 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 231283
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||| || || ||||| | ||||| || || || ||
Sbjct 231284 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 231343
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | ||||||
Sbjct 231344 TAGTGTCTTGACAAAGATCTGCAT 231367
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| || || ||||| || |||||||| || |||| || ||||| || || || || ||
Sbjct 231392 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 231451
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||| ||||| | || ||||| || |||| || |||||||||||||||||
Sbjct 231452 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 231511
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||| || || ||||| | ||||| || || || ||
Sbjct 231512 CGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 231571
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | ||||||
Sbjct 231572 TAGTGTCTTGACAAAGATCTGCAT 231595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159148138574900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |