Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10 300 1e-76 >seq10 Length=365393 Score = 300 bits (332), Expect = 1e-76 Identities = 604/888 (68%), Gaps = 17/888 (2%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| || || |||| ||||||||| || || ||||| || | | ||||| || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 |||||||| || || ||||| || ||| ||| |||||||| || || | || Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 99582 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | || || || ||||| || | |||||| | ||| | || || || || | || Sbjct 99583 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 99642 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | |||||||| |||| || || | ||||| ||| ||| |||||||| || || || Sbjct 99643 TTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAATGAT 99701 Query 4496 ATCTTTTA---TTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 | | | | |||| || | | ||| | || || | | ||| | ||||| || Sbjct 99702 TTGTCTGACAATTTTTTCGTCTGG-GGTATGGTTC--AAATGTGAAAAGAGCAAACAAGC 99758 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 |||||| ||| |||||||| ||||| | |||||| ||||| || ||||| || || || Sbjct 99759 AAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGG 99818 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| |||||||||||||| | ||| || || | |||||||| ||||| ||||| || || Sbjct 99819 CATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACC 99878 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCA 4732 ||| || || ||||| || || || | | ||| | |||| ||| |||||| Sbjct 99879 TTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCA 99938 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT-- 4790 |||||| ||||| | || |||| ||| | || || ||||| | || || || ||| Sbjct 99939 TTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAA 99998 Query 4791 -AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 |||| || |||| ||| |||| || ||||| || || | || ||| |||| Sbjct 99999 GAATTCAC---TTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTC 100055 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 ||||| || ||||| || ||| || || || || || ||| |||| |||| | ||| Sbjct 100056 CGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTG 100115 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 ||| || | | || | || ||||| ||||| || |||||||| ||| || ||||| Sbjct 100116 AACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAA 100175 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTG 5026 ||||| | ||| || || ||| | ||| | || | | || ||||| | Sbjct 100176 GAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATC 100235 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 |||||||||| | | ||||| ||| || ||||||| || || ||||| || || || Sbjct 100236 ATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTT 100295 Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||||| |||||| || |||||| || |||| | ||||| || Sbjct 100296 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048246786580