Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq24 477 1e-129 seq10 313 4e-80 seq9 96.9 5e-15 >seq24 Length=140564 Score = 477 bits (528), Expect = 1e-129 Identities = 1374/2094 (66%), Gaps = 35/2094 (2%) Strand=Plus/Minus Query 75413 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGT 75472 || || |||||||| || || || ||| |||| || |||||||||||| |||| | Sbjct 88796 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 88737 Query 75473 TTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 75532 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 88736 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 88677 Query 75533 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 75592 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 88676 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 88617 Query 75593 ACTTGTTTGATATCATCTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATA 75649 | | ||||| || | |||| ||| | || || ||||| || || ||| || || Sbjct 88616 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 88557 Query 75650 ATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGA 75709 || || || || ||||||||| | | | || ||| |||| | | || | Sbjct 88556 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACCAAATCTCTCAACATATAA 88497 Query 75710 GGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATAT 75769 || || ||||| || ||||| || | || ||||||| || ||||||||| || || Sbjct 88496 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 88437 Query 75770 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCC 75829 ||||| | |||| |||| || | |||||||| ||||||||||||||||| ||||| Sbjct 88436 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 88377 Query 75830 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 75889 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 88376 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 88317 Query 75890 CAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT 75949 | | | | ||| | |||| ||||| | ||||| | || | | ||| Sbjct 88316 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 88257 Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 ||||| | | | || || || | || ||| | | || ||| ||| ||||| || Sbjct 88256 GATCCTTCAAAAGTCTCATATGGTCCATCCCTCATGGATAATTCAACACTTGCCTCCAAA 88197 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 ||| | | |||||| ||||| ||||| | |||| || || | ||||| | |||| Sbjct 88196 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 88137 Query 76070 AAAGGATAATGTAAA-AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 || || |||| | || | || || |||||||| | || || || |||| | |||| || Sbjct 88136 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 88078 Query 76129 TCTATGTCTCTTATTGGAAATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTAT 76185 ||| | |||| |||| || || ||| ||| || ||| || || || |||| || Sbjct 88077 TCTGTTTCTCATATTTGATCTTCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGAT 88021 Query 76186 AATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-- 76243 |||||||| | ||| | || || || | || | || || ||| | | Sbjct 88020 GATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATA 87961 Query 76244 --AATTTTCCATCT-ATCACA---AACATATTAAGA----GCTATAGATGCTAGATTACA 76293 || | | | | ||||| |||| || || || | | |||| |||||| Sbjct 87960 CCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACA 87901 Query 76294 AACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTT 76353 ||| ||| || | || | ||||| | || || ||||| ||| | | || Sbjct 87900 AACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTT 87841 Query 76354 GATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAA 76413 |||| || | ||||||||| || || |||||||||| |||||||| | | || Sbjct 87840 GATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAA 87781 Query 76414 CGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTT 76471 || || ||||||||| | || | ||| | || || | ||| | ||| | | |||| Sbjct 87780 AGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTTA 87723 Query 76472 ATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCT 76531 ||| | || || ||||||||||||| |||||||| || |||||||| Sbjct 87722 ATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCA 87663 Query 76532 CCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCT 76591 || | |||||| ||||||||| |||| | || | | || | ||| || ||| | Sbjct 87662 CCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTT 87603 Query 76592 TCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 76651 | || ||| | || |||||| | |||||| ||||||| |||| |||| ||||| | | Sbjct 87602 TTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCT 87543 Query 76652 CTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGC 76711 ||| |||||| || || || || | | ||| | || || | |||||| |||||| Sbjct 87542 CTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGC 87483 Query 76712 CATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATAT 76771 || || || | ||||| || | |||| |||| ||||||||| || || || | ||| Sbjct 87482 CAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATAC 87423 Query 76772 CTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTT 76831 || |||||||||||| | || || | |||||||||||| || || ||||||||||| || Sbjct 87422 CTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTA 87363 Query 76832 CCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 || | ||||||| ||| || | ||||||| ||| || || || || || || Sbjct 87362 CCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCA 87303 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 |||| || || | |||||| |||||| || |||||||| || || || ||| ||| Sbjct 87302 GTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCC 87243 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 |||| || | ||||| ||||||||||| ||| || | ||| || | Sbjct 87242 TTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGA 87183 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 || ||||| ||||| ||||| | | | || | | ||| || ||||||||||| | Sbjct 87182 GTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAA 87123 Query 77072 TCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCT 77131 || ||||| |||||| || || || || | ||| | | ||| || || | ||| Sbjct 87122 TCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCA 87063 Query 77132 ACAGTCTTATTATTTATTTTCAACAAGTATGATT--TTTCCAAAGTTTTAAAACCAAAAT 77189 || ||||| ||||||| | || ||| || | | |||| || ||||| |||||||||| Sbjct 87062 GCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTTCTAATGTTTTGAAACCAAAAT 87005 Query 77190 AGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG 77249 |||| || |||||||| || ||| ||| | || || | | | | || ||| Sbjct 87004 AGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTT 86945 Query 77250 TAACAATAT-CCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTA 77308 ||||| | ||| | | | ||||| ||||||| || | ||||||||||||| | Sbjct 86944 GGACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCA 86886 Query 77309 ACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGA 77368 | ||| || ||| | | | || || ||| || |||||| ||| |||| Sbjct 86885 ATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAG 86826 Query 77369 TTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT- 77427 || || | || | ||||||||| | | ||||| || ||||| || || || | Sbjct 86825 TTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGT-CATATA 86767 Query 77428 GGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATA 77481 || || |||| || |||||| |||||||||| | ||| ||||| || | ||| Sbjct 86766 AGCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 86713 >seq10 Length=365393 Score = 313 bits (346), Expect = 4e-80 Identities = 606/887 (68%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || |||||||| || ||||| || | | || || || Sbjct 99463 TTTTGGTAGTCTGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 99522 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || ||||| ||||| | || | |||| | | |||||| | |||| Sbjct 99523 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGC---AATC 99579 Query 46459 AGT---CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATG 46515 ||| ||||||||||| || || | |||| ||||| || |||||| || | Sbjct 99580 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 99639 Query 46516 AGTTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 | ||||| ||||| || || || ||| | ||||| ||||||| || || || | || Sbjct 99640 AAGTTGACAGGTAGGGCGTCAGTGAAGTATCTCTT-TTCAATATCAACGGCTTCGGTAAT 99698 Query 46575 TATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634 || | | || ||| || ||| | ||| |||||||| ||| | ||||| || Sbjct 99699 GATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGC 99758 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 |||||| ||| | ||||||||||||| ||| | ||||| || || || | || || Sbjct 99759 AAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGG 99818 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||| | || | |||||| | ||| || || | || || || ||||| ||||| || || Sbjct 99819 CATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACC 99878 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCA 46811 ||| ||||| || ||||| || | |||||| | | ||||| |||| |||||| Sbjct 99879 TTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCA 99938 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 || |||||| || ||||||| ||| | ||| || |||||||| || ||||| || | Sbjct 99939 TTTTAAAGCCCATTCGGCCTTTTCCTTGATACATGGGATTGTTTCAATTGCATTGAATAA 99998 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 || | |||| | |||||| | || ||||| || || | | ||| |||| || Sbjct 99999 GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 100058 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991 |||||||||||| || || || || || || |||||| | || || | ||| || || Sbjct 100059 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 100118 Query 46992 --CTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 | || | ||| || ||| ||||| ||||| ||||| |||||| ||||||||| Sbjct 100119 ATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 100176 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCA 47106 || || | || | ||| || || |||||| ||| | || ||||| ||| Sbjct 100177 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 100236 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | | |||||| || | ||| | ||| || || |||||||| || || ||||| || || Sbjct 100237 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 100296 Query 47167 TACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213 ||||| | ||| || || |||| | ||| ||||| | |||||| || Sbjct 100297 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 100343 >seq9 Length=389137 Score = 96.9 bits (106), Expect = 5e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 219927 CATGAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 219868 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || |||||| | | || || || || | || |||| ||||||||| |||| ||| Sbjct 219867 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 219808 Query 76726 TATCGCCATA-ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 ||| || | | |||| |||| ||| || || ||||| || | |||| ||||| || Sbjct 219807 TAT-GCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 219749 Query 76785 TATAAACTCTCAACATTGGAAT 76806 | | ||| | ||||| || || Sbjct 219748 TGAATACTTTTAACATAGGGAT 219727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932082963200