Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 3e-26
seq115 118 2e-21
seq11 118 2e-21
seq1 105 2e-17
>seq2
Length=717657
Score = 134 bits (148), Expect = 3e-26
Identities = 157/211 (74%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| ||||| || |||||||||||||| |||| ||||||||| ||||||||||
Sbjct 277373 CAAG-TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTA 277431
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || |||||||| || || ||||| | | || |||||||| ||||| |
Sbjct 277432 ATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGA 277491
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||||| |||||| | || | | |||| ||| || ||||| | ||||| || || |
Sbjct 277492 TCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTAC 277551
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | ||||| || || | ||||| ||
Sbjct 277552 CGGTTAAGGTCTTGACAAAAATTTGCATCTT 277582
>seq115
Length=8510
Score = 118 bits (130), Expect = 2e-21
Identities = 158/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||||||||||| || ||||| |||||||| || | |||||||| ||
Sbjct 1926 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1867
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||||| || || || |||||||| || || ||||| | | || ||||||||
Sbjct 1866 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1807
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| ||||| |||||| | || | |||| || ||| ||||| | |||||
Sbjct 1806 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1747
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108
||| || || || | ||| || || || | ||||| |||
Sbjct 1746 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1707
>seq11
Length=336598
Score = 118 bits (130), Expect = 2e-21
Identities = 158/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||||||||||| || ||||| |||||||| || | |||||||| ||
Sbjct 4932 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 4991
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||||| || || || |||||||| || || ||||| | | || ||||||||
Sbjct 4992 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 5051
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| ||||| |||||| | || | |||| || ||| ||||| | |||||
Sbjct 5052 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 5111
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108
||| || || || | ||| || || || | ||||| |||
Sbjct 5112 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 5151
>seq1
Length=782669
Score = 105 bits (116), Expect = 2e-17
Identities = 150/210 (71%), Gaps = 1/210 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || || || || ||||
Sbjct 231617 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 231675
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||| ||||| ||||||||||| | | || || ||||| || || |
Sbjct 231676 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 231735
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| || ||| || || | || || |||||||
Sbjct 231736 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 231795
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
| || || ||||| || |||| ||||||||
Sbjct 231796 CTGTTAGTGTCTTGACAAAGATCTGCATTT 231825
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || || || || ||||
Sbjct 230933 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 230991
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||| ||||| ||||||||||| | | || || ||||| || || |
Sbjct 230992 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 231051
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| || ||| || || | || || |||||||
Sbjct 231052 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 231111
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || |||| ||||||
Sbjct 231112 CTGTTAGTGTCTTGACAAAGATCTGCAT 231139
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || || || || ||||
Sbjct 231161 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 231219
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||| ||||| ||||||||||| | | || || ||||| || || |
Sbjct 231220 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 231279
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| || ||| || || | || || |||||||
Sbjct 231280 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 231339
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || |||| ||||||
Sbjct 231340 CTGTTAGTGTCTTGACAAAGATCTGCAT 231367
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || || || || ||||
Sbjct 231389 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 231447
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || ||||| ||||| ||||||||||| | | || || ||||| || || |
Sbjct 231448 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 231507
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| || ||| || || | || || |||||||
Sbjct 231508 TCTTCGACTTGACATTGTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 231567
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || ||||| || |||| ||||||
Sbjct 231568 CTGTTAGTGTCTTGACAAAGATCTGCAT 231595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816956334460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |