Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02]
260 sequences; 11,679,144 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq115 145 2e-29
seq11 145 2e-29
seq2 140 7e-28
seq1 114 3e-20
>seq115
Length=8510
Score = 145 bits (160), Expect = 2e-29
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| |||| ||| || || |||||
Sbjct 1902 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 1843
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| |||||||||||||| || | || || |
Sbjct 1842 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 1783
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | |||||||| | || || |||||||| || ||||| |||||
Sbjct 1782 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 1723
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 1722 AAAAATTTGCATCTT 1708
>seq11
Length=336598
Score = 145 bits (160), Expect = 2e-29
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| |||| ||| || || |||||
Sbjct 4956 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 5015
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| |||||||||||||| || | || || |
Sbjct 5016 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 5075
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | |||||||| | || || |||||||| || ||||| |||||
Sbjct 5076 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 5135
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 5136 AAAAATTTGCATCTT 5150
Score = 96.9 bits (106), Expect = 7e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | |||||||| |||| || ||||| | || ||||| |||||||||
Sbjct 164255 GGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATTAAGGTGGACTTACCAGCACCA 164196
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148
|| || || || | |||||| | | || |||| || | || | || ||||| |
Sbjct 164195 TTTGGACCACATAAACCATATCTTCTACCTCTCTTTAGTCTTAATTGAGTCTTGTTTAAC 164136
Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| ||||||| ||||||| || || ||||| ||||| | ||| | ||| || ||
Sbjct 164135 AAAATCTTAGCACCATAAGCAAGGGAGAATTCACAGTTACATAAGTCTTCACC 164083
>seq2
Length=717657
Score = 140 bits (154), Expect = 7e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| |||| ||| || || |||||
Sbjct 277388 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 277447
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| ||||| |||||||||||| || || |
Sbjct 277448 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 277507
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| |||| ||| ||||| | || || |||||||| || || ||||| ||
Sbjct 277508 GTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 277567
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 277568 AAAAATTTGCATCTT 277582
>seq1
Length=782669
Score = 114 bits (126), Expect = 3e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 231633 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 231692
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 231693 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 231752
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 231753 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 231812
Query 283089 AATATCTGCATTT 283101
|| ||||||||||
Sbjct 231813 AAGATCTGCATTT 231825
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 230949 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 231008
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 231009 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 231068
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 231069 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 231128
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 231129 AAGATCTGCAT 231139
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 231177 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 231236
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 231237 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 231296
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 231297 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 231356
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 231357 AAGATCTGCAT 231367
Score = 105 bits (116), Expect = 1e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 231405 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 231464
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || |
Sbjct 231465 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTG 231524
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 231525 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 231584
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 231585 AAGATCTGCAT 231595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046735713050040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |