Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10 338 7e-88 >seq10 Length=365393 Score = 338 bits (374), Expect = 7e-88 Identities = 588/849 (69%), Gaps = 7/849 (1%) Strand=Plus/Plus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||||||||| ||||| ||||| | | || || || |||||||| || |||||||| | Sbjct 99485 TTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTTG 99544 Query 23300 AAGTATTATATACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAA 23359 | | ||||| || ||| |||| | | | || |||||||| ||||| || | Sbjct 99545 TAACGTCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCAACAAACTCGA 99604 Query 23360 TATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATA 23419 ||| |||||||||||||| | || ||||| | | || || || | || ||| | Sbjct 99605 CATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCAGTGA 99664 Query 23420 AGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAG 23479 || || |||||||| ||| || || |||| ||||| | || || ||| | Sbjct 99665 AGTATCTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTCGTCTG 99724 Query 23480 GTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCC 23539 | | || || |||| ||| | ||||| |||||||| ||||| |||||||| | Sbjct 99725 GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTCATCTC 99784 Query 23540 TACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAA 23599 ||| ||||| || || || || || || |||||||| || |||| ||||| | ||| | Sbjct 99785 TACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGA 99844 Query 23600 ATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGAC 23659 | || | |||||||| || || ||||||||||| |||||||| ||||| ||||| | || Sbjct 99845 AGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCACCA-AC 99903 Query 23660 GTGTAC-CAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAAT 23718 | | |||| ||||| | ||| | |||||||||| | ||| | ||||| Sbjct 99904 CTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAAGCCCATTCGGCCTTTTCC 99963 Query 23719 TTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTT 23778 || | ||| |||||||||||||| || || | || |||| | |||| | Sbjct 99964 TTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTG 100023 Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || |||||||| | |||| ||| |||| |||||||| ||||| || ||| || Sbjct 100024 ATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGG 100083 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCA-TTAAAAAATCTTTTAGCTAA 23897 |||||||| |||||| |||| || | | |||||||||| || | |||| | | | |||| Sbjct 100084 AACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-TCTCAACTAA 100142 Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||| || || ||||||||| |||||||||||| || ||||| | || || Sbjct 100143 ATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAA 100202 Query 23958 TCTTTCA---TCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTC 24014 ||||||| || | || || |||||||||| | |||||| || | ||||| ||| Sbjct 100203 TCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTC 100262 Query 24015 ATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTG 24074 || | ||||| ||| ||| || ||| |||||| ||||||| || | || | Sbjct 100263 CTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTT 100322 Query 24075 TATTGGAAA 24083 |||||||| Sbjct 100323 GATTGGAAA 100331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521486305164000