Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F001983325.1_202017-02-02] 260 sequences; 11,679,144 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq2 109 4e-19 >seq1 Length=782669 Score = 127 bits (140), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| |||||| |||| ||| ||||| |||||| ||||||||||| || Sbjct 231365 CATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 231424 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | |||| | |||| || || || || || || || || | | |||||| |||| Sbjct 231425 CGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 231484 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||| ||||| ||| |||||| ||| || ||| | |||||||||| || Sbjct 231485 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGT--CAATGGTGTCGGATGAC 231542 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || || || || || || ||||| || ||||| ||||| Sbjct 231543 TCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231595 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| |||||| |||| ||| ||||| |||||| ||||||||||| || Sbjct 231137 CATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 231196 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | |||| | |||| || || || || || || || || | | |||||| |||| Sbjct 231197 CGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 231256 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| |||||| ||| | | | |||||||||| || || Sbjct 231257 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTC 231316 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || || || || || || ||||| || ||||| ||||| Sbjct 231317 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231367 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| |||||| |||| ||| ||||| |||||| ||||||||||| || Sbjct 231593 CATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 231652 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | |||| | |||| || || || || || || || || | | |||||| |||| Sbjct 231653 CGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 231712 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| |||||| ||| | | | |||||||||| || || Sbjct 231713 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTC 231772 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || || || || || || ||||| || ||||| ||||| Sbjct 231773 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231823 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | |||||| |||| ||| ||||| |||||| ||||||||||| || | | Sbjct 230913 CCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 230972 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| | |||| || || || || || || || || | | |||||| |||| || Sbjct 230973 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 231032 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| |||||| ||| | | | |||||||||| || |||||| Sbjct 231033 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 231092 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || || || || || || ||||| || ||||| ||||| Sbjct 231093 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 231139 >seq2 Length=717657 Score = 109 bits (120), Expect = 4e-19 Identities = 167/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| |||||| |||| |||||| || ||||||||||||||||| ||| Sbjct 277350 ATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCG 277409 Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | |||| | | || || | ||||| || |||||||| | | || || || | Sbjct 277410 GATAAAGTT--CTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAG 277467 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||||| || ||| | |||||||| | || Sbjct 277468 GTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGT--CGATGGTGTCAGAAGA 277525 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| ||||| || || | |||||| || || |||||||| Sbjct 277526 TTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 277579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989259280420