Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq9 398 9e-106
seq7 334 9e-87
>seq9
Length=441842
Score = 398 bits (440), Expect = 9e-106
Identities = 1383/2140 (65%), Gaps = 41/2140 (2%)
Strand=Plus/Minus
Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860
||| | |||||||||||| | || | || | | || | || || ||||| || ||
Sbjct 320787 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 320728
Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATC 52920
|| || || |||| || || |||||||| |||| ||| | ||||
Sbjct 320727 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 320668
Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980
| | |||||| ||||||||||| ||||| | | | || || || || ||||||||
Sbjct 320667 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 320608
Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039
| || || |||||||| | || ||||| | ||| ||||| || || ||| || ||||
Sbjct 320607 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 320549
Query 53040 CTGGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096
|||| || | || |||||||| || ||| |||| || || || || ||
Sbjct 320548 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 320489
Query 53097 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 53156
||||||||| | | | || |||| |||| | | || || || || | || |
Sbjct 320488 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 320429
Query 53157 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 53216
|||| || | || ||||| | || ||||||||| || || ||||| | | || |
Sbjct 320428 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 320369
Query 53217 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 53276
| | || | |||||||| ||||| ||||||||||| ||||| || | || |||||
Sbjct 320368 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 320309
Query 53277 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 53334
| | ||| | | ||||||| || |||| | ||||| | | | | | ||
Sbjct 320308 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 320249
Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394
| || ||||| | ||| | || |||||| || | ||
Sbjct 320248 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 320191
Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454
|| |||||||| ||| | || || |||| ||| ||||| || ||| | | ||||||
Sbjct 320190 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 320131
Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 53513
|||||| || || | |||| || || | |||||| | ||||||||| |||| | |
Sbjct 320130 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 320072
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| | || || || ||||| || ||||| ||||||| | | || ||||| | |||| |||
Sbjct 320071 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 320012
Query 53574 TAGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630
| || | | ||| ||| || |||||| || || |||| || |||||||| | ||
Sbjct 320011 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 319955
Query 53631 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATTGT 53680
|| | | || ||||| | ||| |||| |||| | || ||||
Sbjct 319954 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGT 319895
Query 53681 CCATCTATTACAA-ACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737
| ||| || ||| | ||| |||||||| | || | ||||||||| ||| ||
Sbjct 319894 C-ATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 319836
Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797
| || | ||||| | || ||| ||| | ||| | | ||||| || |||
Sbjct 319835 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 319776
Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857
|||||||||||| || |||||||| ||||||||||| | ||||| || |||||||||
Sbjct 319775 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 319716
Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917
||| | || | ||||| |||| | ||| | | || || ||| | || |
Sbjct 319715 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 319656
Query 53918 CTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977
|| ||||||||| ||| ||||| ||| || || || || || | |||| |
Sbjct 319655 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 319596
Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037
|| ||||| |||| || | | || | ||| ||| | | | || |||| || |
Sbjct 319595 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 319536
Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097
||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || ||
Sbjct 319535 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 319476
Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157
|| || || | | ||| | || | | |||||| |||||||| || || | |||
Sbjct 319475 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAA--TAT 319418
Query 54158 ATGGTCATAACTC--CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215
|| || ||| | |||| | ||| || || || || || | || || || |||||||
Sbjct 319417 ATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTAT 319358
Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275
|| | || || | |||||||||||| |||||||||| |||||| || |||| |||||
Sbjct 319357 TAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAG 319298
Query 54276 TTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335
||| | | | ||||||| || || || || || || || |||| || || |
Sbjct 319297 AACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCA 319238
Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395
| || ||| ||| || ||||||||||| || || || ||| ||| |||| || ||
Sbjct 319237 AAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTA 319178
Query 54396 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455
||||| ||||||||| | | ||| |||| ||| || | || |||||||| |
Sbjct 319177 AGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCAT 319118
Query 54456 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT 54515
| || || | | | || | | ||| || || || ||| | || || |||||
Sbjct 319117 GTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCAC 319058
Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575
|||||| || || || || | ||||| | || || || ||||| | ||||| |
Sbjct 319057 CATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCAT 318998
Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635
||||| | | | || |||| || ||||| |||||||||||||| || ||||
Sbjct 318997 TTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGT 318938
Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695
||| || ||| ||| | | | | ||| | || ||| | || | ||| |
Sbjct 318937 CTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAG 318878
Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755
| ||||||| || |||| | |||| ||||||||||||| | ||| || ||| |
Sbjct 318877 TCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTT 318818
Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815
|| | |||||| ||| || |||||| || |||| ||||| | || | ||
Sbjct 318817 GATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTC 318758
Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGG 54872
|||| || | | |||||||| ||||| | | ||| || || || || |||| |
Sbjct 318757 TAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAG 318701
Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912
| | | | | || ||||| || ||||| || |||| |||
Sbjct 318700 CAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661
>seq7
Length=736534
Score = 334 bits (370), Expect = 9e-87
Identities = 608/884 (69%), Gaps = 12/884 (1%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || || | ||||||||||| || |||||||| | | || || ||
Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
||||| || ||| ||||||| ||||| | || | ||| | | || ||| || |
Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023
| ||||||||| |||||||| | ||| ||||| || |||||| || | |
Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480
Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
|| || || || || |||| ||| | ||||| ||||||| || || || || || ||
Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421
Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142
||| || ||| ||| || | || |||||| ||| | |||||| || ||
Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361
Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202
|||| |||| ||| || ||||||| ||| | |||||||| ||||| | || |||||
Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301
Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262
| || | |||||| | ||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241
Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 24319
|| || ||||| || | | || ||| || | || | || | ||||| ||
Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 707181
Query 24320 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379
| ||||| |||||||| | ||| | ||| || ||||| || || ||||| || | |
Sbjct 707180 TAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 707121
Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439
| |||| || |||||| | || ||||||||||| | | ||| ||||||||||
Sbjct 707120 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 707061
Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499
||||||||| || ||||| || || ||||||||| ||||||| | ||| || || ||
Sbjct 707060 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 707001
Query 24500 TAT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557
| | ||| || || ||||||||||||| ||||| || ||| || ||||| |||
Sbjct 707000 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 706943
Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 24614
|| | || | || || || |||| | | | | | || ||||||||||
Sbjct 706942 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 706883
Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 24674
| |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || |||
Sbjct 706882 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 706823
Query 24675 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718
|| | ||| || || ||||| | |||||||| | |||||| ||
Sbjct 706822 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721518363280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |