Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq9 398 9e-106 seq7 334 9e-87 >seq9 Length=441842 Score = 398 bits (440), Expect = 9e-106 Identities = 1383/2140 (65%), Gaps = 41/2140 (2%) Strand=Plus/Minus Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 320787 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 320728 Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATC 52920 || || || |||| || || |||||||| |||| ||| | |||| Sbjct 320727 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 320668 Query 52921 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 52980 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 320667 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 320608 Query 52981 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 53039 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 320607 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 320549 Query 53040 CTGGAAGGTTTG-TA--TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCT 53096 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 320548 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 320489 Query 53097 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 53156 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 320488 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 320429 Query 53157 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 53216 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 320428 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 320369 Query 53217 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 53276 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 320368 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 320309 Query 53277 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 53334 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 320308 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 320249 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 | || ||||| | ||| | || |||||| || | || Sbjct 320248 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 320191 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 320190 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 320131 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT-A 53513 |||||| || || | |||| || || | |||||| | ||||||||| |||| | | Sbjct 320130 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 320072 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 320071 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 320012 Query 53574 TAGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGT 53630 | || | | ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 320011 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 319955 Query 53631 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATTGT 53680 || | | || ||||| | ||| |||| |||| | || |||| Sbjct 319954 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTTGT 319895 Query 53681 CCATCTATTACAA-ACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCA 53737 | ||| || ||| | ||| |||||||| | || | ||||||||| ||| || Sbjct 319894 C-ATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 319836 Query 53738 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 53797 | || | ||||| | || ||| ||| | ||| | | ||||| || ||| Sbjct 319835 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 319776 Query 53798 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTT 53857 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 319775 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 319716 Query 53858 TCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTAT 53917 ||| | || | ||||| |||| | ||| | | || || ||| | || | Sbjct 319715 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 319656 Query 53918 CTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 || ||||||||| ||| ||||| ||| || || || || || | |||| | Sbjct 319655 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 319596 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 || ||||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 319595 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 319536 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 ||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 319535 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 319476 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 319475 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAA--TAT 319418 Query 54158 ATGGTCATAACTC--CAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215 || || ||| | |||| | ||| || || || || || | || || || ||||||| Sbjct 319417 ATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTAT 319358 Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275 || | || || | |||||||||||| |||||||||| |||||| || |||| ||||| Sbjct 319357 TAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAG 319298 Query 54276 TTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 ||| | | | ||||||| || || || || || || || |||| || || | Sbjct 319297 AACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCA 319238 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 | || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 319237 AAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTA 319178 Query 54396 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 54455 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| | Sbjct 319177 AGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCAT 319118 Query 54456 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATT 54515 | || || | | | || | | ||| || || || ||| | || || ||||| Sbjct 319117 GTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCAC 319058 Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 54575 |||||| || || || || | ||||| | || || || ||||| | ||||| | Sbjct 319057 CATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCAT 318998 Query 54576 TTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 54635 ||||| | | | || |||| || ||||| |||||||||||||| || |||| Sbjct 318997 TTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGT 318938 Query 54636 CTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 54695 ||| || ||| ||| | | | | ||| | || ||| | || | ||| | Sbjct 318937 CTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAG 318878 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | ||||||| || |||| | |||| ||||||||||||| | ||| || ||| | Sbjct 318877 TCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTT 318818 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 || | |||||| ||| || |||||| || |||| ||||| | || | || Sbjct 318817 GATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTC 318758 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGG 54872 |||| || | | |||||||| ||||| | | ||| || || || || |||| | Sbjct 318757 TAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAG 318701 Query 54873 CTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 | | | | | || ||||| || ||||| || |||| ||| Sbjct 318700 CAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 334 bits (370), Expect = 9e-87 Identities = 608/884 (69%), Gaps = 12/884 (1%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 ||||| || ||| ||||||| ||||| | || | ||| | | || ||| || | Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | ||||||||| |||||||| | ||| ||||| || |||||| || | | Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480 Query 24024 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421 Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 24142 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361 Query 24143 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 24202 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301 Query 24203 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 24262 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241 Query 24263 TACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 24319 || || ||||| || | | || ||| || | || | || | ||||| || Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 707181 Query 24320 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 24379 | ||||| |||||||| | ||| | ||| || ||||| || || ||||| || | | Sbjct 707180 TAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 707121 Query 24380 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 24439 | |||| || |||||| | || ||||||||||| | | ||| |||||||||| Sbjct 707120 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 707061 Query 24440 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499 ||||||||| || ||||| || || ||||||||| ||||||| | ||| || || || Sbjct 707060 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 707001 Query 24500 TAT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557 | | ||| || || ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 707000 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 706943 Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 24614 || | || | || || || |||| | | | | | || |||||||||| Sbjct 706942 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 706883 Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 24674 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 706882 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 706823 Query 24675 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 || | ||| || || ||||| | |||||||| | |||||| || Sbjct 706822 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721518363280