Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 8e-16 seq5 93.3 4e-14 seq4 86.0 5e-12 >seq6 Length=742668 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || |||||||| ||||| ||||| | | ||| | || || | || || || Sbjct 86748 GTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCT 86689 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | |||||||| || ||||| || | |||||||| || ||||||||| || Sbjct 86688 GCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTG 86629 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | || ||| | |||||||||||| |||||||| || Sbjct 86628 ACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTC 86569 Query 21159 TTGACAAATATTTGCATTTTGA 21180 |||||||| |||||||| |||| Sbjct 86568 TTGACAAAAATTTGCATCTTGA 86547 >seq5 Length=1193180 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| || |||||||||||||| ||||| | || ||| | || || | || || || Sbjct 1151933 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 1151874 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | |||||||| || ||||| || | ||||||||||| ||| || || Sbjct 1151873 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 1151814 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| || Sbjct 1151813 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 1151754 Query 21158 TTTGACAAATATTTGCATTTT 21178 ||| ||||| |||||||| || Sbjct 1151753 TTTAACAAAAATTTGCATCTT 1151733 >seq4 Length=1293945 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| || || ||||||| || ||||| || Sbjct 737913 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 737972 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || ||||||||||||||||||| || | || |||||||| |||||| || Sbjct 737973 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 738032 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || || | |||| |||| || || || ||||| |||| || Sbjct 738033 ACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 738092 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 738093 TTGACAAAGATCTGCAT 738109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259143390876