Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 8e-16
seq5 93.3 4e-14
seq4 86.0 5e-12
>seq6
Length=742668
Score = 98.7 bits (108), Expect = 8e-16
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| || |||||||| ||||| ||||| | | ||| | || || | || || ||
Sbjct 86748 GTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCT 86689
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | |||||||| || ||||| || | |||||||| || ||||||||| ||
Sbjct 86688 GCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTG 86629
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| | || ||| | |||||||||||| |||||||| ||
Sbjct 86628 ACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTC 86569
Query 21159 TTGACAAATATTTGCATTTTGA 21180
|||||||| |||||||| ||||
Sbjct 86568 TTGACAAAAATTTGCATCTTGA 86547
>seq5
Length=1193180
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| || |||||||||||||| ||||| | || ||| | || || | || || ||
Sbjct 1151933 AGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACC 1151874
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | |||||||| || ||||| || | ||||||||||| ||| || ||
Sbjct 1151873 TGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTT 1151814
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | ||| ||| ||| | ||| ||| | |||||| ||||| || ||||| ||
Sbjct 1151813 GACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGT 1151754
Query 21158 TTTGACAAATATTTGCATTTT 21178
||| ||||| |||||||| ||
Sbjct 1151753 TTTAACAAAAATTTGCATCTT 1151733
>seq4
Length=1293945
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || ||||| ||||||| || || ||||||| || ||||| ||
Sbjct 737913 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCA 737972
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| ||||||||||||||||||| || | || |||||||| |||||| ||
Sbjct 737973 GCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 738032
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | || || | |||| |||| || || || ||||| |||| ||
Sbjct 738033 ACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTC 738092
Query 21159 TTGACAAATATTTGCAT 21175
|||||||| || |||||
Sbjct 738093 TTGACAAAGATCTGCAT 738109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259143390876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |