Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 7e-17
seq5 91.5 1e-13
>seq4
Length=1293945
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 737882 ACCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG- 737940
Query 118571 CATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627
| |||| | || ||||| || ||||| |||||| | || || | |||||| || ||
Sbjct 737941 -AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGG 737998
Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687
|| || ||||||||||| || || || || | || | |||||| | |||
Sbjct 737999 TGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTC 738058
Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 738059 CACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 738109 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 738168
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 738169 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 738225
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | ||| | |||||| | ||
Sbjct 738226 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACAT-TTCAATGGTGTCGGATGACT 738284
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 738285 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 738336 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 738395
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 738396 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 738452
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 738453 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 738512
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 738513 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 738564 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 738623
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 738624 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 738680
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 738681 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 738740
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 738741 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 738792 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 738851
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 738852 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 738908
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 738909 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 738968
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 738969 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 739020 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 739079
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | |||||| || |
Sbjct 739080 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTG 739136
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 739137 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 739196
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 739197 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/232 (70%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | |||||||| |||||||||| || ||||| || || |||||||| ||
Sbjct 739448 TACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 739507
Query 118570 TCATAGTGCGCGTA---TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGG 118626
| |||| | || ||||| || ||||| |||||| | || || | ||||| || |
Sbjct 739508 --AGAGTGTCC-TACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCT-TGCTGGTCTG 739563
Query 118627 GAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686
| || || ||||||||||| || || || || | || | |||||| | ||
Sbjct 739564 GTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACT 739623
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| | || | |||||||| || || || || ||||| ||||||||
Sbjct 739624 CCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739675
>seq5
Length=1193180
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || | ||||||||| || ||||| | ||||| || |||||||||||||| ||
Sbjct 1151963 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGA 1151904
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| | ||| || | || || || || |||| || | || || || || ||
Sbjct 1151903 CAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGG 1151844
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||||||| ||||| || || | |||| ||||| | ||||||
Sbjct 1151843 AATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 1151784
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || || || | |||||| |||||||| |||||
Sbjct 1151783 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1151736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830341839612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |