Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq7 302 4e-77 >seq7 Length=736534 Score = 302 bits (334), Expect = 4e-77 Identities = 601/876 (69%), Gaps = 27/876 (3%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||| || || |||||||| || | | ||||| || |||||||| || || Sbjct 707644 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 707585 Query 16019 GGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAACAATAATCTATCCGCC 16075 |||||| | ||| | |||| || || || || ||| | | || || |||||| || Sbjct 707584 GGATTTGT--AACG-TCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCA 707528 Query 16076 ACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATT 16135 ||||| || | |||||| ||| ||||| ||||| || | || || ||||| | Sbjct 707527 ACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGG 707468 Query 16136 GCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACA 16195 || || || || | || ||||| |||| ||| ||||| | || || | ||| || | Sbjct 707467 GCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATT 707408 Query 16196 CTATTTAACGGAGGGTTTAAT--AAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253 | || | | |||| | | || ||| ||| | | |||||||||||| ||| | Sbjct 707407 TT-TTCGTCTG-GGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTA 707350 Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313 | ||||| || |||| || | |||||| || || || | ||||||||| | |||| | Sbjct 707349 AACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCT 707290 Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373 |||| | ||| || || | |||||||||||||| ||||| ||||||||||| || |||| Sbjct 707289 TTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAA 707230 Query 16374 ATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaat 16433 |||| ||||| | ||| | || | || |||| | | ||||||||| ||||| | Sbjct 707229 ATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATT 707170 Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtt--tttttC 16491 || |||| ||| | ||| || | || |||||||| ||| || |||| ||| | Sbjct 707169 CGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAAT-AAGAATTCACTTTCC 707111 Query 16492 TTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTC 16551 |||| |||| || |||||||| || | |||| ||| |||| |||||||| || || Sbjct 707110 TTTG-GATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTC 707052 Query 16552 CATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAA 16611 ||| || || || ||||| || ||| |||| || | ||||| || ||| | || Sbjct 707051 CATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAA 706992 Query 16612 CCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA---- 16667 | || |||| ||||| || ||||| ||||| ||| ||||| ||||| || | Sbjct 706991 ATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCT 706932 Query 16668 TGTGTTTAATAAAAttt--ttttCGTT--ATCTGAAAGTTTTAACCAGTCAGAAAAATCT 16723 || | || || ||| |||||||| |||| | ||| ||| ||| |||||| Sbjct 706931 TGAAATGAAGAATCTTTCATTTTCGTTCAATCT-ATTGTT----CCAATCATGCAAATCT 706877 Query 16724 TTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTC 16783 || || | ||| | || || ||||||| ||||| || | ||||| || ||||||| | Sbjct 706876 TTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGC 706817 Query 16784 CATATGTCTTCGTAAACAATAGGAAACACAACATAC 16819 || || || | || || ||||| | |||| || Sbjct 706816 CAAATTTCGTGATACTTGATTGGAAAGAGAACAAAC 706781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511936404600