Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq7 327 1e-84 >seq7 Length=736534 Score = 327 bits (362), Expect = 1e-84 Identities = 606/876 (69%), Gaps = 21/876 (2%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 707644 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 707585 Query 13988 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAA 14045 |||||||| | | || || |||| |||||||||| | | | |||| |||||| |||| Sbjct 707584 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 707527 Query 14046 TGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 14105 ||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 707526 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 707467 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 | || || ||| ||||| ||| || || ||| | || || | | ||||| Sbjct 707466 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 707407 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 14225 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 707406 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 707347 Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 707346 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 707287 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 707286 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 707227 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | | || | ||| ||||| |||| | ||| | | ||||||||| |||||||| | Sbjct 707226 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 707167 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC-CTTCTCTTTA 14464 |||| ||| ||| | ||||||||||| ||||| ||||| ||| ||| |||| Sbjct 707166 CCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 707107 Query 14465 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524 | ||| | |||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 707106 GATCTTTGA-TGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 707048 Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---TGAGTAAAAT 14581 || || || ||||| |||||| |||| |||| ||| || || |||| |||| Sbjct 707047 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAG--AAAT 706990 Query 14582 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14641 | || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 706989 -TCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 706931 Query 14642 TTAATAAAGTATTGCTCTTCATT---GCTGAGT---TTTTTCCAATCGGCTAAATCCTTA 14695 ||| ||| || || |||||| | | | | || |||||||| ||||| || Sbjct 706930 GAAATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTG 706874 Query 14696 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCAT 14755 || ||||| | ||| || | ||||| ||| || | || || || |||||| ||| Sbjct 706873 GAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAA 706814 Query 14756 ATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14791 ||||| | ||| || ||||| | ||||| ||| Sbjct 706813 ATTTCGTGATACTTGATTGGAAAGAGAACAAACCTT 706778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345533677480