Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq9 459 3e-124 seq7 307 1e-78 >seq9 Length=441842 Score = 459 bits (508), Expect = 3e-124 Identities = 1444/2217 (65%), Gaps = 38/2217 (2%) Strand=Plus/Minus Query 62039 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 62098 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 320787 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 320728 Query 62099 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 62158 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 320727 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 320668 Query 62159 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62218 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 320667 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 320608 Query 62219 TTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62277 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 320607 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 320549 Query 62278 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCT 62334 |||| || | || |||||||| || ||| |||| || || || || || Sbjct 320548 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 320489 Query 62335 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGA 62394 ||||||||| | | | || |||| |||| | | || ||||| || | |||| Sbjct 320488 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 320429 Query 62395 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCAT 62454 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 320428 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 320369 Query 62455 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62514 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 320368 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 320309 Query 62515 TAAGACCGTATGTTCTGATTTTATCTTTTAGATGT-TCCCAATTCCAAAGATCCGACGGT 62573 | | ||| | | ||||||| || |||| ||| ||||| | | | | | || Sbjct 320308 TCAAACCATTGGCCTTGATTTTCTCCTTTA-ATGAATCCCAGTCATATAAGTTGGTTGGC 320250 Query 62574 ACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTA 62633 | | | ||||| | ||| | || |||||| || | || Sbjct 320249 TTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGTC 320190 Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATG 62693 ||||||||||| ||| | || || || | ||| ||||| || ||| | | ||||||| Sbjct 320189 TCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAATG 320130 Query 62694 GTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AA 62752 |||||||| || | |||| || || | |||||| || ||||||||| |||| | || Sbjct 320129 GTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCAA 320071 Query 62753 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62812 | || || || || || || ||||| ||||||| | | || ||||| | |||| |||| Sbjct 320070 CATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATATT 320011 Query 62813 AGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 || | | ||| ||| || |||||| || || |||| || |||||||| | || Sbjct 320010 TGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGTT 319954 Query 62870 TCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGCC 62919 | | | || ||||| | ||| |||| |||| | || || || Sbjct 319953 TTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTTG 319896 Query 62920 -CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 |||| || ||| | ||| |||||||||| || | |||||| || ||| || Sbjct 319895 TCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTCC 319836 Query 62976 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | || | ||||| | || ||| ||| | ||| | | |||||| || ||| Sbjct 319835 TCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAA 319776 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 |||||||||||| || |||||||| ||||||||||| | ||||| || ||||||||| Sbjct 319775 TTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTT 319716 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63155 ||| | |||| ||||| |||| | ||| | | | || || ||| | || | Sbjct 319715 TCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCT 319656 Query 63156 CTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63215 || | ||||||||| ||| ||||| ||| || ||| || || || | |||| | Sbjct 319655 CTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTC 319596 Query 63216 AATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63275 || | ||| |||| || | | || | ||| ||| | | | || |||| || | Sbjct 319595 AAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCC 319536 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 ||||| | |||||||||||| | ||| |||| |||||||| |||| ||| || || Sbjct 319535 ATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTA 319476 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || || || | | ||| | || | | |||||| |||||||| || || | ||| Sbjct 319475 CCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATAT 319416 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 | || | | ||||| | ||| || || || || || | || || || ||||||||| Sbjct 319415 AGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTA 319356 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 | || || | |||||||||||| || || ||| ||||||| ||||||| ||||| Sbjct 319355 AAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAA 319296 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 319295 CCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAA 319236 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 || ||| ||| || || |||||||| ||||| ||| ||| || |||| || || Sbjct 319235 GCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAG 319176 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 ||||| ||||||||| | | | ||| |||| ||| || | || |||||||| || Sbjct 319175 AAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGT 319116 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755 || || | | | || | | ||| || || |||||| | || || ||||| | Sbjct 319115 GTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACCA 319056 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 ||||| || || || || | ||||| | || || || ||||| |||| || ||| Sbjct 319055 TGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATTT 318996 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 ||| | || | || |||| || ||||| |||||||||||||| || |||||| Sbjct 318995 ATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTCT 318936 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 | || ||| ||| | || | ||| | || ||| | || || ||| || Sbjct 318935 CTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGTC 318876 Query 63936 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63995 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 318875 TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTGA 318816 Query 63996 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 | | |||||| ||| || |||||| ||| |||| ||||| || || | ||| Sbjct 318815 TTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCTA 318756 Query 64056 GCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGCT 64112 || || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 318755 GCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGCA 318699 Query 64113 GCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATA 64172 || | | | || ||||| || ||||| || |||| ||| | || ||||| |||| | Sbjct 318698 GCTAAATTATCTAATTCGACAGTTGTAACACCATCATAAACACCAGAAATAATCTTCTGA 318639 Query 64173 GCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT-TCTAAT 64228 | ||| | ||||| | || | || ||| ||||| |||||| |||||| Sbjct 318638 GTAATTGCAGAAGGATGCACGTGTCTTGAGTCTAAACCATATGCCAATTTCTCTAAT 318582 >seq7 Length=736534 Score = 307 bits (340), Expect = 1e-78 Identities = 602/884 (68%), Gaps = 12/884 (1%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || ||||| ||||| | ||| | |||| | | || ||| || | Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | ||||||||| || || || | ||| ||||| || |||||| || | | Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480 Query 33471 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 || || || || || |||| ||| | ||||| |||||| || || | || || || Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421 Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| || | ||| || ||||||| ||| | ||||| || ||||| | || ||||| Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 | || | |||||| | ||| || ||||| || ||||| || || ||||| || ||||| Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 33766 || |||||||| || | | |||||| || | || | || | ||||| || Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 707181 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 | ||||| |||||||| | ||| | ||| || || ||||| || ||||| || | | Sbjct 707180 TAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 707121 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 | |||| || |||||| | |||||||| ||||| | | ||| |||||||||| Sbjct 707120 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 707061 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 ||||||||| || || || || || ||||||||| ||||||| | ||| || || || Sbjct 707060 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 707001 Query 33947 TGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAC 34004 | | ||| || || ||||||||||||| ||||| |||||| || ||||| ||| Sbjct 707000 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 706943 Query 34005 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 34061 || | || | || || || |||| | | | | | || |||||||||| Sbjct 706942 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 706883 Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 706882 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 706823 Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 || | ||| || || ||||| | |||||| || | |||||| || Sbjct 706822 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817513400080