Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9 484 1e-131 seq7 325 6e-84 >seq9 Length=441842 Score = 484 bits (536), Expect = 1e-131 Identities = 1400/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Minus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 320787 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 320728 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || || || |||| || ||||||||||| ||||| ||| | |||| Sbjct 320727 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 320668 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 320667 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 320608 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 78949 | || || |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 320607 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 320549 Query 78950 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 79006 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 320548 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 320489 Query 79007 CTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 79066 |||||||| | | | || |||| |||| | | || || || || | || | Sbjct 320488 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 320429 Query 79067 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCAT 79126 |||| || | || ||||| | || ||||||||| || || ||||| | |||| | Sbjct 320428 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 320369 Query 79127 TATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTC 79186 | | || | |||||||| ||||| || || ||||| ||||| || | || ||||| Sbjct 320368 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 320309 Query 79187 TAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGG-- 79244 | | ||| | | ||||||| || |||| || ||||| || | || || || Sbjct 320308 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC----ATATAAGTTGGTT 320253 Query 79245 GACAACATTCC--AAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 | | | | || |||||||| | ||||| | ||| | || |||||| | Sbjct 320252 GGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAA 320193 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 || ||||| ||||| ||| | | ||||||| ||| ||||| || || | | |||| Sbjct 320192 GTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAA 320133 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 |||||||| ||||| | |||| || || | ||||||| | ||||||||| |||| | Sbjct 320132 ATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCT 320074 Query 79423 -AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 || | || || || ||||| || ||||| ||||||| | | || ||||| | |||| | Sbjct 320073 CAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCAT 320014 Query 79482 ATTAGAAAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || | | ||| ||| || |||||| || || |||| || |||||||| | Sbjct 320013 ATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAA 319957 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC------- 79591 || | | || || | || | || || ||| | | | | | Sbjct 319956 GTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAACAGTTCTT 319897 Query 79592 --CATCTATTACAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | ||| ||| || ||| || | ||||||||| ||| || Sbjct 319896 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 319837 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | ||||| | |||||| ||| | || | | || || || || Sbjct 319836 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 319777 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 319776 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 319717 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTA 79826 |||| | |||| ||||| |||| | ||| | | | || || ||| | | || Sbjct 319716 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 319657 Query 79827 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTC 79886 ||| ||||||||| |||| ||||||||| || ||| || || || | ||||| Sbjct 319656 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 319597 Query 79887 TAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTT 79946 || ||||| ||| ||| | | || | ||| ||| ||| | || |||| || Sbjct 319596 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 319537 Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006 |||||| | |||||||||||| | ||| |||| |||||| | |||| || || || Sbjct 319536 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 319477 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 319476 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 319417 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 || || | | || |||| ||| || || || || || | || || || |||||||| Sbjct 319416 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 319357 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 | | || || | |||||||||||| ||||||||||||||||| || |||| ||||| Sbjct 319356 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 319297 Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 319296 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 319237 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || ||| ||| || ||||||||||| || || ||| ||| || |||| || || Sbjct 319236 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 319177 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 319176 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 319117 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 || || | | | |||| | ||| || || |||||| | || || ||||| Sbjct 319116 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 319057 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 |||||| || || || || | ||||| | || || || ||||| | ||||| ||| Sbjct 319056 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 318997 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 |||| | || | ||| |||| || ||||| |||||||||||||| || ||||| Sbjct 318996 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 318937 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 318936 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 318877 Query 80607 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 80666 ||||||| || |||| | |||| ||||||||||||| || ||| | ||| | Sbjct 318876 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 318817 Query 80667 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 80726 | | |||||| ||| || |||||| ||| |||| ||||| | || | ||| Sbjct 318816 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 318757 Query 80727 GGCGGCTAAAATGGCATAATCTGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 80783 || || || | |||||||||||||| | | ||| || || || || |||| || Sbjct 318756 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 318700 Query 80784 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 || | | | || ||||| || ||||| || |||| ||| Sbjct 318699 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 325 bits (360), Expect = 6e-84 Identities = 611/888 (69%), Gaps = 20/888 (2%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| || || | ||||||||||| || ||||| || | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | |||||| || ||||| || | ||| ||||| || |||||| || | | Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480 Query 49849 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || || || || || |||| ||| | ||||| |||||| || || || || || || Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 ||| || ||| ||| || | ||| |||||| ||| | |||||| || || Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 |||| || | ||| || ||||||| ||| || |||||||| ||||| | || ||||| Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 | || | |||||| | ||| || ||||| |||||||| ||||| ||||| || ||||| Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-ACTGGCGCTGTCATGT---ATCCACT 50143 || || ||||| || || | |||||| || | | || || | || | ||||| | Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTT-ATCTGCAATCCATT 707182 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 || ||||| |||||||| | ||| | ||| || || ||||| || ||||| || | Sbjct 707181 TTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA 707122 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | |||| || |||||| | |||||||| ||||| | | ||| ||||||||| Sbjct 707121 ATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAAT 707062 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 |||||||||| || || || || || ||||||||| ||||||| | ||| || || | Sbjct 707061 GAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACAT 707002 Query 50324 CTGT--ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 | | | ||| || ||| ||||||||||||| ||||| || ||| || ||||| || Sbjct 707001 CACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAA 706944 Query 50382 CGC--CAATACATGTTTTATAAAATGT----TTTTCGTTGGGTGTTAGTTTATTCCAATC 50435 ||| || | || | | ||| | |||||||| | | || |||||||| Sbjct 706943 CGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT---ATTGTTCCAATC 706887 Query 50436 ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 50495 || | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || Sbjct 706886 ATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTT 706827 Query 50496 ATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 ||||| | ||| || || ||||| | |||||| || | |||||| || Sbjct 706826 GTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268701238040